Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I20
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    79   1e-15
U42834-3|AAA83583.2|  860|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z92825-8|CAB07316.2|  469|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z75955-18|CAB00126.2|  469|Caenorhabditis elegans Hypothetical p...    28   3.8  
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 35/93 (37%), Positives = 51/93 (54%)
 Frame = -1

Query: 417 KAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLHSCNNCG 238
           K V C +CKYT+  A+  C  + H L      KRFFKC  CK RTV  E++P+  C +C 
Sbjct: 598 KVVTCNQCKYTSQFASSECIKKEHKLIKHTADKRFFKCTGCKKRTVCFEMMPVKHCAHCN 657

Query: 237 SSRWEKAPMLREKKITTLSDGLSXQG*RRNIFG 139
            ++WE+  M  E+K+   ++ L  +G  R   G
Sbjct: 658 ENKWERVAMKDERKVVLDTENLLLRGEERPFVG 690


>U42834-3|AAA83583.2|  860|Caenorhabditis elegans Hypothetical
           protein F28B4.2 protein.
          Length = 860

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 315 FFKCLD---CKNRTVSLELLPLHSCNNCGSSR 229
           F  CLD   C NR++ +E  P+HS  +  SSR
Sbjct: 480 FLPCLDENECFNRSLEIEKPPMHSTPDLSSSR 511


>Z92825-8|CAB07316.2|  469|Caenorhabditis elegans Hypothetical
           protein C13C4.2 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 254 ECRGSNSKETVLFLQSKHLKNLLNVSNTFRGCLSSL 361
           E +  N K+  +++++KH +    +  TFR C+S +
Sbjct: 427 ENQSKNQKDFHVYIKAKHFQKHKKMGTTFRKCISCM 462


>Z75955-18|CAB00126.2|  469|Caenorhabditis elegans Hypothetical
           protein C13C4.2 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 254 ECRGSNSKETVLFLQSKHLKNLLNVSNTFRGCLSSL 361
           E +  N K+  +++++KH +    +  TFR C+S +
Sbjct: 427 ENQSKNQKDFHVYIKAKHFQKHKKMGTTFRKCISCM 462


>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
           protein F38E11.5 protein.
          Length = 1000

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 270 LLPLHSCNNCGSSRWEKAPMLREKKITTLSDGLSXQG*RRNIFGWTSCYWQKYKS 106
           LL L S N+     WE A ++R  +IT+ S   S  G    I G  S Y  KY +
Sbjct: 441 LLALRSNNSLCFFDWESAVLVRRIEITSKSIYWSDNGEMVAICGDDSFYVLKYSA 495


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,778,839
Number of Sequences: 27780
Number of extensions: 195418
Number of successful extensions: 570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)