Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I20
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.0  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   6.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 74  SCFYVSCLVPIDLYF 118
           S FY+ C++ + LY+
Sbjct: 350 SSFYIPCIIMVFLYY 364


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 132 SCYWQKYKSIG 100
           SCYW + K++G
Sbjct: 141 SCYWPRGKNLG 151


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 321 KRFFKCLDCKNRTVSLELLPLH 256
           K+ F C  C+   VSL  L +H
Sbjct: 14  KKSFSCKYCEKVYVSLGALKMH 35



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 441 LSTYKLPCKAVRCAK 397
           + T+ LPCK   C K
Sbjct: 36  IRTHTLPCKCHLCGK 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,781
Number of Sequences: 438
Number of extensions: 2343
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)