Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_I17
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 87 7e-18
05_01_0273 + 2115257-2115589,2115706-2115766,2115876-2115970,211... 86 2e-17
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912... 80 1e-15
01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887... 76 2e-14
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 65 4e-11
11_01_0028 - 215821-215880,216114-216284 47 1e-05
10_06_0136 - 11114409-11114576,11114656-11114784,11114873-111150... 31 0.51
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 31 0.51
05_04_0125 - 18241542-18242129 31 0.68
01_04_0138 + 16554175-16554822 30 1.2
12_02_0403 - 18627246-18627557,18627904-18628836 30 1.6
05_02_0049 - 6083364-6084111,6084140-6084246 30 1.6
07_01_0432 + 3290546-3291911,3291972-3291988 29 2.1
12_02_0913 + 24246217-24247557 29 2.7
05_04_0234 + 19282196-19282818,19282948-19283347 29 2.7
02_02_0310 - 8842286-8843314 29 2.7
10_06_0145 + 11215895-11216860 28 4.8
09_04_0296 + 16461482-16461544,16462087-16463097 28 4.8
08_01_0891 + 8775537-8776127,8776403-8776513 28 4.8
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 4.8
01_06_1487 - 37715421-37715942 28 4.8
01_06_0963 + 33441731-33442096,33442175-33442270 28 4.8
01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268... 28 4.8
06_01_0636 + 4627533-4628546 28 6.3
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 27 8.3
06_01_0754 - 5644310-5646292 27 8.3
05_07_0198 - 28359092-28359457,28359574-28359729,28359844-283600... 27 8.3
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 27 8.3
03_06_0762 + 36078414-36078539,36078700-36078750,36078832-360789... 27 8.3
02_02_0225 + 8051203-8052618 27 8.3
01_05_0781 + 25140652-25142010 27 8.3
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 87.4 bits (207), Expect = 7e-18
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Frame = -1
Query: 580 MVAQGLV-QPVXSFYLNRDPXXXXXXXXXXXGSDPAXYRGDLVRVPLLRDTYWEFHMDSV 404
MV QGLV +PV SF+ NR G DP+ Y+G+ VP+ + YW+F M V
Sbjct: 212 MVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMGDV 271
Query: 403 NVNXSR--FCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 278
+ FCA GCSAIAD+GTSL+AGP+ + +N +GAT +
Sbjct: 272 LIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGV 315
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/89 (35%), Positives = 41/89 (46%)
Frame = -2
Query: 282 PSPSGSTSWTAASYRTCRESPLXXXXXXXXXXXXXXXXGWRNSGITVCLSGFMALDVPKP 103
PSP G +S S + E C+SGF A+D+P P
Sbjct: 418 PSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPP 477
Query: 102 MGPLWILGDVFIGKYYTEFERGEPPARFA 16
GPLWILGDVF+G Y+T F+ G+ FA
Sbjct: 478 RGPLWILGDVFMGAYHTVFDYGKMRVGFA 506
>05_01_0273 +
2115257-2115589,2115706-2115766,2115876-2115970,
2116072-2116184,2116278-2116551,2116923-2117036,
2117169-2117233,2117325-2117466,2117547-2117666,
2118153-2118241,2118349-2118433
Length = 496
Score = 85.8 bits (203), Expect = 2e-17
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Frame = -1
Query: 565 LVQPVXSFYLNRDPXXXXXXXXXXXGSDPAXYRGDLVRVPLLRDTYWEFHMDSVNVNX-- 392
L V SF+LNRDP G DP Y+GD VP+ R YW+F+M + ++
Sbjct: 210 LADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMGDLLIDGHS 269
Query: 391 SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 278
+ FCA+GC+AI D+GTSL+AGP+ V +N A+GA I
Sbjct: 270 TGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGI 307
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = -2
Query: 153 GITVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFERGEPPARFA 16
G TVC+SGFMA D+P P GPLWILGDVF+G Y+T F+ G+ FA
Sbjct: 448 GQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFA 493
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 271 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFG 152
G+ V C I +P + FTIA F L Y++++ Q G
Sbjct: 409 GESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGG 448
>01_02_0039 -
10490522-10490606,10490674-10490810,10491107-10491248,
10491355-10491419,10491528-10491641,10491846-10492119,
10492215-10492327,10492405-10492499,10492602-10492662,
10492774-10493103
Length = 471
Score = 80.2 bits (189), Expect = 1e-15
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Frame = -1
Query: 580 MVAQGLVQP-VXSFYLNRDPXXXXXXXXXXXGSDPAXYRGDLVRVPLLRDTYWEFHMDSV 404
M Q L++ V SF+LNRDP G DP Y+G VP+ R YW+F M +
Sbjct: 203 MKEQQLIEKDVFSFWLNRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGDL 262
Query: 403 NVNX--SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAI 278
++ + FC+ GC+AIAD+GTSL+ GP+ V +N A+GA I
Sbjct: 263 LIDDYSTGFCSGGCAAIADSGTSLLGGPTTIVAQINHAIGAEGI 306
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 16/62 (25%)
Frame = -2
Query: 153 GITVCLSGFMALDVPKPMGPLW----------------ILGDVFIGKYYTEFERGEPPAR 22
G TVC+SGFMA DVP P GPLW ILGDVF+ Y+T F+ G+
Sbjct: 407 GQTVCISGFMAFDVPPPRGPLWYTNYTVIKKRELHVVRILGDVFMAAYHTVFDFGKNRIG 466
Query: 21 FA 16
FA
Sbjct: 467 FA 468
>01_05_0795 +
25287449-25287967,25288078-25288138,25288640-25288734,
25288827-25288939,25289480-25289648,25289777-25289816,
25289906-25289970,25290150-25290263,25290398-25290462,
25290572-25290725,25290798-25290914,25292489-25292545
Length = 522
Score = 75.8 bits (178), Expect = 2e-14
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Frame = -1
Query: 583 NMVAQGLV-QPVXSFYLNRDPXXXXXXXXXXXGSDPAXYRGDLVRVPLLRDTYWEFHMDS 407
NM+ Q LV V SF+LNR+ G+D + Y+GD + R YW+F M
Sbjct: 265 NMIQQSLVTDKVFSFWLNRNANDINGGEIVFGGADESHYKGDHTYTRVTRKAYWQFEMGD 324
Query: 406 --VNVNXSRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIA 275
+ + C GC+ IAD+GTSLIAGP + ++A +GAT +A
Sbjct: 325 FLIGGRSTGICVDGCAVIADSGTSLIAGPIAAIAQIHAHIGATGVA 370
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 319 EVEALNAAVGATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTL 191
++E N G G YV DC I HLP V F+I G F L
Sbjct: 459 KLEYANQLCGNMPSPVGSYV-DCRHIGHLPNVAFSIGGRAFEL 500
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 64.9 bits (151), Expect = 4e-11
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 147 TVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFERGEPPARFAPA 10
T C+SGF A+D+P P GPLWILGDVF+G Y+T F+ G FA A
Sbjct: 473 TQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGNLKVGFAEA 518
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = -1
Query: 583 NMVAQGLV-QPVXSFYLNRDPXXXXXXXXXXXGSDPAXYRGDLVRVPLLRDTYWEFHMDS 407
NMV QGLV PV SF+ NR G DP Y+G+ VP+ R YW+ +D
Sbjct: 224 NMVRQGLVVDPVFSFWFNRHADEGQGGEIVFGGIDPNHYKGNHTYVPVTRKGYWQ--VDL 281
Query: 406 VNVNXSRFCAQGCSAIADTG-TSLIAGPSKEVEALNAAVGATAI 278
+ C+ CS T+ + + +N +GAT +
Sbjct: 282 ILKLVGILCSWVCSNSRFWNFTAYWSHGMAIITQINEKIGATGV 325
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 271 GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQ 158
G+ VDCS + +P + FTI GN F L+ Y+L+V +
Sbjct: 432 GESSVDCSSLASMPDIAFTIGGNKFVLKPEQYILKVGE 469
>11_01_0028 - 215821-215880,216114-216284
Length = 76
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = -1
Query: 484 DPAXYRGDLVRVPLLRDTYWEFHMDSV--NVNXSRFCAQGCSAIADTGTSLIAGPSKEVE 311
DP ++GD V + R YW+F+ + + + + F A+GC+AI D+ TSL+ P+ V
Sbjct: 2 DPKHFKGDHTYVHVSRKGYWQFNTRDLLTDGHSTGFYAKGCAAIVDSRTSLLTDPTAIVA 61
Query: 310 ALNAAVGATAI 278
+N A A I
Sbjct: 62 QVNHATEAEGI 72
>10_06_0136 -
11114409-11114576,11114656-11114784,11114873-11115016,
11115130-11115299,11116441-11116528,11116590-11116652,
11116678-11116799,11118506-11118671
Length = 349
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 62 LPMNTSPRIHRGPMGFGTSSAMKPDRH--TVMPELRHPEHVVV 184
LP++ SPR HR P T+ PD H T L HP V++
Sbjct: 26 LPVSPSPRHHRRPHSTATACRAAPDLHSSTGAAILPHPSKVLI 68
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 21 TELAVP-RVRTPCSTCR*TRPPGSTEGPWASARPAP*SRTGTP 146
T A P R RTP STC PP + P P SR+ P
Sbjct: 71 TATATPKRTRTPTSTCAPPPPPHARHAPMTGQTPVAGSRSSRP 113
>05_04_0125 - 18241542-18242129
Length = 195
Score = 31.1 bits (67), Expect = 0.68
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +2
Query: 95 GPMGFGTSSAMKPDRHTVMPELRHPEHV------VVALEREVVPGDGKGDSRQVRYEAAV 256
G +G G S++K T P R E + V LER+ G GDSR +R +
Sbjct: 55 GSVGVGGRSSVKMIEETKFPTHRAEEGLPLVVVGVTKLERDWNMGLD-GDSR-IRVDE-- 110
Query: 257 HDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGRAA 373
H GDGRG RR G +GG G R + G+G A
Sbjct: 111 H----RGDGRGGRRRRRG---VGGSGGSRGSGHGEGGGA 142
>01_04_0138 + 16554175-16554822
Length = 215
Score = 30.3 bits (65), Expect = 1.2
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +2
Query: 65 PMNTSPRIH---RGPMGFGTSSAMKPDRHTVMPELRHPEHVVVALEREVVPGDGKGDSRQ 235
P + R H RG G G+S A + R +R E VA E+ G G G+S +
Sbjct: 44 PQRAAARSHQQRRGAGGTGSSGAQRGKRREETEAVRERE---VA---ELTEGHGDGESSR 97
Query: 236 VRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRAR 352
R AA+H RG+ RR G RR+R
Sbjct: 98 RREAAALHRSTMR---RGSRRRKAAIGRRTGKSGTRRSR 133
>12_02_0403 - 18627246-18627557,18627904-18628836
Length = 414
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 131 ASWRWTCRSPWALCGSWGTCSSASTT 54
ASWR PW+LC +WG S T
Sbjct: 218 ASWRAVGVPPWSLCIAWGVVSVDGAT 243
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -3
Query: 212 RRERLHARGQRLRAPGGAIRASRCACPASWRWTCRSPWALCGSWGTCSSASTTRSS 45
RR R G A A A RC +SWR + SP A TCS+A T +S
Sbjct: 37 RRRRSGGAGVPADAASAAASAGRCWSSSSWRSSPPSPAAR----STCSTARTAPAS 88
>07_01_0432 + 3290546-3291911,3291972-3291988
Length = 460
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 98 PMGFGTSSAMKPDRHTVMPELRHPEHVVVALEREVVPGDGKGDSRQVRYEAAVHDVLPEG 277
PM G ++ +PD + P+ V+ +ER +VP + D + R AA+ VLP G
Sbjct: 161 PMRVGAAAVTRPDA------VVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTG 214
>12_02_0913 + 24246217-24247557
Length = 446
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 409 SVNVNXSRFC--AQGCSAIADTGTSLIAGPSKEVEALNAAVGATAIAFG 269
+ N + FC A GCS IA G ++AG + EA G +AFG
Sbjct: 153 AANDDIIHFCDLAAGCSVIAGYGAGVVAG-TLGTEAFAFQSGTAELAFG 200
>05_04_0234 + 19282196-19282818,19282948-19283347
Length = 340
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -3
Query: 194 ARGQRLRAPGGAIRASRCACPASWRWTCRSPWALCGS--WGTCSSASTT 54
AR ++ A G R C C + W W C + CG CS T
Sbjct: 30 ARAEQCGAQAGGARCPNCLCCSRWGW-CGTTSDFCGDGCQSQCSGCGPT 77
>02_02_0310 - 8842286-8843314
Length = 342
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = +2
Query: 89 HRGPMGFGTSSAMKPDRHTVMPELR-HPEHVVVALEREVVPGDGKGDSRQ--VRYEAAVH 259
H G GTS A+ P R P + E V+P D +Q +R+ H
Sbjct: 40 HNGGDAAGTSVAIVPPYLDAAAAARDEPAAAAASPEGPVIPVDDDAADQQGFLRFPCRYH 99
Query: 260 DVLPEGDGRGAHRRVEGFH 316
G HR EGFH
Sbjct: 100 CRYRHHMRHGGHRHGEGFH 118
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 207 PAMVKVTRGRCGMRLQSTTYCPKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQK 386
P +VK G C + STT A V+ T + + TS A + P + P +
Sbjct: 229 PRVVKTEPGCCSVSEASTTTTADAADVSSTGSSPSPTS-SNQAATATPPAPRPPPPLPET 287
Query: 387 RLXLTLTESMWN 422
L TE+ W+
Sbjct: 288 IQQLDFTEAPWD 299
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -3
Query: 77 TCSSASTTRSSNAGNRQLGSRPP 9
TCSSASTT + + +R+ S+PP
Sbjct: 143 TCSSASTTDTESTTHRRRHSQPP 165
>08_01_0891 + 8775537-8776127,8776403-8776513
Length = 233
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -3
Query: 236 PAASHLYHRRERLHARGQRLRAPGGAIRASRCACPASWRWTCRSPWALCGS 84
PAA + R RLHAR +RL A G A A W +PW L S
Sbjct: 136 PAAMDMGEIRRRLHARRRRL-AYGDGEAGDAAAAAAGW-----APWRLIRS 180
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = -1
Query: 241 PHLPRVTFTIAGNDFTLEGN---DYVLRVAQFGHHGVPVRLHGAGRAEAHGPSVDPGG 77
PHLP +A L + R HHG HG G + HGP V G
Sbjct: 41 PHLPSKPLNLAARSPLLLARRSLPFAPRAHGDHHHGHHHHHHGHGHSHHHGPEVHGSG 98
>01_06_1487 - 37715421-37715942
Length = 173
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 194 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGPGDQRRARVGDGR 367
R ++ G+G G +V H+ PE DGR HR V G G +RR R D R
Sbjct: 34 RRMLGGEG-GARGEVEIPTEEHEDEPEPDGRRGHRPVVSD---GHRGRRRRCRNSDLR 87
>01_06_0963 + 33441731-33442096,33442175-33442270
Length = 153
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 259 VDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGH 149
VDC P P + L G ++ LR +QFG+
Sbjct: 89 VDCQPTPSFPGGILVFVSGNLQLAGEEHQLRFSQFGN 125
>01_06_0457 -
29524544-29525962,29526518-29526606,29526841-29526892,
29527573-29527677,29528181-29528208,29528279-29528343,
29528808-29528880,29528932-29529113
Length = 670
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 260 DVLPEGD-GRGAHRRVEGFHLLGGPGDQR 343
D+LPEG GRG R ++G++L+ D+R
Sbjct: 383 DILPEGHPGRGRSRVMKGWYLIYSSTDER 411
>06_01_0636 + 4627533-4628546
Length = 337
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 9 RRARTELAVPRVRTPCSTCR*TRPP-GSTEGPWASARPAP 125
R A T LAVP P +T + PP G P ASA AP
Sbjct: 19 RDAPTSLAVPLPLPPAATTTTSAPPAGGAMHPLASAGAAP 58
>09_02_0322 -
7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 27.5 bits (58), Expect = 8.3
Identities = 29/106 (27%), Positives = 37/106 (34%)
Frame = +2
Query: 14 GANRAGGSPRSNSV*YLPMNTSPRIHRGPMGFGTSSAMKPDRHTVMPELRHPEHVVVALE 193
G R GG S + P R G+G + P RH + L E
Sbjct: 21 GRGRFGGGGGSR---FSAARDDPPPRRSSSGWGVAP---PSRHLWVGSLSPGVAAADLSE 74
Query: 194 REVVPGDGKGDSRQVRYEAAVHDVLPEGDGRGAHRRVEGFHLLGGP 331
+ GD +G SR A E D A R ++G HL G P
Sbjct: 75 LFLRCGDVEGISRDPGRSFAFVTFAREEDAVAAVRELQGIHLRGAP 120
>06_01_0754 - 5644310-5646292
Length = 660
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 293 HRRVEGFHLLGGPGDQRRARVGD-GRAALGTEAAXVDIDRVHVELPVRVPE 442
HR V+ ++L G GD AR+GD G A L A RV L PE
Sbjct: 452 HRDVKANNVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPE 502
>05_07_0198 -
28359092-28359457,28359574-28359729,28359844-28360011,
28360082-28360206,28360288-28360405,28360491-28360718,
28360959-28361099,28361433-28361498,28361770-28361862,
28361965-28362225
Length = 573
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 270 PKAMAVAPTAALRASTSLEGPAISDVPVSAMAEQPWAQKRLXLT 401
PK +A A AA +A T+ PA PVS A P A +R +T
Sbjct: 12 PKTLAAAAAAAPKAPTA---PAAVSFPVSHAACAPLAARRRAVT 52
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 27.5 bits (58), Expect = 8.3
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 98 PMGFGTSSAMKPDRHTVMPELRHPEHVVVALEREVVPGDGKGDSRQVR--YEAAVHDVLP 271
P SS+++P LRHP HV V G G SR++R Y H ++
Sbjct: 353 PATSAASSSVQPFHAEAAAHLRHPRHVSVG-------GSGSARSRRMRDSYHGFHHLMIE 405
Query: 272 EGD-GRGAHRR 301
+ + GR A R
Sbjct: 406 DNNLGRSAAER 416
>03_06_0762 +
36078414-36078539,36078700-36078750,36078832-36078981,
36079055-36079803,36079914-36080013,36080116-36080259,
36080333-36080452,36080532-36080846
Length = 584
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 71 NTSPRIHRGPMGFGTSSAMKPDRHTVMPELRHPEH---VVVALEREVVPGDGKGDSRQVR 241
+T+P H + GT +A P H HP+ V R+ + + +Q+R
Sbjct: 9 STTPPPHLHQLLSGTGAAPPPSSHDDAHPHPHPQSRRTVPARRLRQRLEQEVSELKKQLR 68
Query: 242 YEAAVHDVL 268
E AVHD+L
Sbjct: 69 NEEAVHDIL 77
>02_02_0225 + 8051203-8052618
Length = 471
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 212 RRERLHARGQRLRAPGGAIRASRCACPASWRWTCRSPW 99
R + A R R+PGGA W+ T R+P+
Sbjct: 433 RAREMQAAAARARSPGGASHRELDEVAGKWKQTNRAPY 470
>01_05_0781 + 25140652-25142010
Length = 452
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 150 ITVCLSGFMALDVPKPMGPLWILGDVFIGKY 58
+ L FMALD PL++ G+ + GKY
Sbjct: 151 LLAALQSFMALDPAFRARPLFLTGESYAGKY 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,509,727
Number of Sequences: 37544
Number of extensions: 389420
Number of successful extensions: 1689
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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