Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I12
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.    100   5e-21
BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.        100   5e-21
BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked glyco...   100   5e-21
M73482-1|AAA59939.1|  390|Homo sapiens neuromedin B receptor pro...    31   6.5  
BC095542-1|AAH95542.1|  390|Homo sapiens neuromedin B receptor p...    31   6.5  
AL589674-1|CAH70473.1|  390|Homo sapiens neuromedin B receptor p...    31   6.5  

>Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.
          Length = 438

 Score =  100 bits (240), Expect = 5e-21
 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = -3

Query: 323 MFIVNFIGVVCARSLHYQFYSWYFHSLPYILW---SNNFSTIFRFLLLALVEMCWNTYPS 153
           +F  NFIG+  +RSLHYQFY WYFH+LPY+LW   +   + + R L+L L+E+ WNTYPS
Sbjct: 342 LFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPS 401

Query: 152 TIFSSVTLHICHVAIL 105
           T  SS  LHICH  IL
Sbjct: 402 TSCSSAALHICHAVIL 417



 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 812 GLPFLISNPVSYIKGSXDIGRVFNHTWTVNYRFLDSEIF 696
           GLPFL+ NP  Y+  S D+GR F   WTVN+RFL   +F
Sbjct: 246 GLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALF 284


>BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.
          Length = 433

 Score =  100 bits (240), Expect = 5e-21
 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = -3

Query: 323 MFIVNFIGVVCARSLHYQFYSWYFHSLPYILW---SNNFSTIFRFLLLALVEMCWNTYPS 153
           +F  NFIG+  +RSLHYQFY WYFH+LPY+LW   +   + + R L+L L+E+ WNTYPS
Sbjct: 337 LFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPS 396

Query: 152 TIFSSVTLHICHVAIL 105
           T  SS  LHICH  IL
Sbjct: 397 TSCSSAALHICHAVIL 412



 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 812 GLPFLISNPVSYIKGSXDIGRVFNHTWTVNYRFLDSEIF 696
           GLPFL+ NP  Y+  S D+GR F   WTVN+RFL   +F
Sbjct: 241 GLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALF 279


>BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked
           glycosylation 3 homolog (S. cerevisiae,
           alpha-1,3-mannosyltra protein.
          Length = 438

 Score =  100 bits (240), Expect = 5e-21
 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = -3

Query: 323 MFIVNFIGVVCARSLHYQFYSWYFHSLPYILW---SNNFSTIFRFLLLALVEMCWNTYPS 153
           +F  NFIG+  +RSLHYQFY WYFH+LPY+LW   +   + + R L+L L+E+ WNTYPS
Sbjct: 342 LFTSNFIGICFSRSLHYQFYVWYFHTLPYLLWAMPARWLTHLLRLLVLGLIELSWNTYPS 401

Query: 152 TIFSSVTLHICHVAIL 105
           T  SS  LHICH  IL
Sbjct: 402 TSCSSAALHICHAVIL 417



 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/39 (53%), Positives = 26/39 (66%)
 Frame = -3

Query: 812 GLPFLISNPVSYIKGSXDIGRVFNHTWTVNYRFLDSEIF 696
           GLPFL+ NP  Y+  S D+GR F   WTVN+RFL   +F
Sbjct: 246 GLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALF 284


>M73482-1|AAA59939.1|  390|Homo sapiens neuromedin B receptor
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +3

Query: 294 HNTNKIYNKHWKD-----KQLS*NIKVYTVITCFCWFANWLLYRF 413
           HN    YN+H K      K+L+  + V+     FCWF N +LY +
Sbjct: 244 HNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMY 288


>BC095542-1|AAH95542.1|  390|Homo sapiens neuromedin B receptor
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +3

Query: 294 HNTNKIYNKHWKD-----KQLS*NIKVYTVITCFCWFANWLLYRF 413
           HN    YN+H K      K+L+  + V+     FCWF N +LY +
Sbjct: 244 HNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMY 288


>AL589674-1|CAH70473.1|  390|Homo sapiens neuromedin B receptor
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +3

Query: 294 HNTNKIYNKHWKD-----KQLS*NIKVYTVITCFCWFANWLLYRF 413
           HN    YN+H K      K+L+  + V+     FCWF N +LY +
Sbjct: 244 HNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMY 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,826,874
Number of Sequences: 237096
Number of extensions: 1767501
Number of successful extensions: 4132
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4121
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)