Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I05
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0288 - 23870228-23870965,23871515-23871584,23871662-238717...    30   1.7  
07_03_1697 - 28795521-28797328,28797430-28797550                       29   2.9  
06_01_0015 + 181155-181323,182074-182195,182425-182449,182664-18...    29   5.1  
04_03_0619 - 18079520-18079693,18081071-18081156,18081731-18082730     29   5.1  
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107           28   6.7  
01_05_0578 - 23389066-23389302,23389428-23389571,23389721-23390722     28   6.7  
08_01_0022 - 163512-163817,165963-166032,166074-166151,166399-16...    28   8.8  

>05_05_0288 -
           23870228-23870965,23871515-23871584,23871662-23871749,
           23871825-23871882,23871963-23872039,23872111-23872258
          Length = 392

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 729 ISENTNETMPNDSVEIAELEALPKLEPRQIR 637
           +S+ +NE + N   EI E  ++ +LEPRQI+
Sbjct: 195 VSQVSNECLSNAVTEIRESSSIHRLEPRQIQ 225


>07_03_1697 - 28795521-28797328,28797430-28797550
          Length = 642

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -1

Query: 481 CCSDGGHRNSPHHGHXRICFWLVHVIQKSQGCC*CRLPGLRRDRTY-CRQLRRPQASSVR 305
           CC D  H  S HHG    C    H     Q C  CR     R RT      RRP A++ +
Sbjct: 355 CCHDARHGPSCHHG----CCPPHH---GKQACTSCRGQHCCRPRTQESPAPRRPAAAAAK 407

Query: 304 PHVSLPTPETANHC 263
             V    P   NHC
Sbjct: 408 EVVKRRAP-PRNHC 420


>06_01_0015 +
           181155-181323,182074-182195,182425-182449,182664-182828,
           183203-183321
          Length = 199

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 314 LSPPTCITTNTRNSKSL--QWRGMDLTNATALC 222
           L PP C+ T T  S SL  QWR   LT A   C
Sbjct: 8   LRPPPCVATCTPPSPSLSSQWRRRRLTLAQPYC 40


>04_03_0619 - 18079520-18079693,18081071-18081156,18081731-18082730
          Length = 419

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 594 DLDKLKIGLYGDDGSTNKPHHIHLLESGSSDPSDSIFGVA 475
           D ++ K+G  G DG +NK  +    E G  +  + + GVA
Sbjct: 357 DEEESKLGQAGGDGGSNKDDNGDDREDGEEEKGEDVLGVA 396


>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
          Length = 151

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -2

Query: 327 DRKLAQSAHMYHYQHQKQQIIAMERNGLDQRH----GSMSDPESDEENEEGDYTV 175
           D+K  Q  H +H+Q Q+QQ    ++    + H     S+ D  S   N+     V
Sbjct: 67  DKKQQQEHHPHHHQQQQQQYQRQQQQQQQEDHSDAASSVKDSSSSSSNKSSSLQV 121


>01_05_0578 - 23389066-23389302,23389428-23389571,23389721-23390722
          Length = 460

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 247 SIPLHCNDLLFLVLVVIHVGGLS*LAVAGAVDSRSGHAVSRVIYISSSLGS 399
           S+PL  +D LF++      G     AV G + SRS HA   V  +S ++ S
Sbjct: 87  SVPLVLDDALFVIPTTPQAGAG---AVTGRISSRSHHAAVVVDKVSRAIDS 134


>08_01_0022 -
           163512-163817,165963-166032,166074-166151,166399-166439,
           166830-166880,166997-167065,167924-168019,169217-169328,
           169629-169774,169965-170015,170171-170281,170378-170447,
           172496-172935
          Length = 546

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 388 SLGSFG*RVPAKSKSXNGHGEGCSYGRHQSNTKNRVGRIRRTGFQQ 525
           SLG    +  A+    NG+G+G SY  H+   +  + +I+ T  ++
Sbjct: 438 SLGLLQMKASARRDQVNGNGDGQSYANHRLLRQAALTKIKSTASEE 483


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,775,024
Number of Sequences: 37544
Number of extensions: 419255
Number of successful extensions: 1256
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)