Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I05
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    27   0.60 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   7.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.8  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -1

Query: 358 RDRTYCRQLRRPQASSVRPHVSLPTPETANHCNGEEWT*PTPRLYVGPG 212
           RD+ YC  L   + ++ +        +T + C  +E   P P +Y  PG
Sbjct: 35  RDKVYCGHLDCTRVATFKGERFCTLCDTRHFCECKETREPLPYMYACPG 83


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 30  IFHFHNNIKLTTMITIYCPYKIVIVYTF 113
           I+ FH  +KL+T ITI     IV++++F
Sbjct: 198 IYPFHPRMKLSTCITI-----IVLIWSF 220


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 312 QSAHMYHYQHQKQQIIAMERNGLDQRHGS 226
           Q  H +H+  Q+QQI+   +N L  R+ S
Sbjct: 782 QQQHHHHHLQQQQQIVG--KNTLYSRNSS 808


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,848
Number of Sequences: 2352
Number of extensions: 15626
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)