Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_I05
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004217-1|AAH04217.1| 325|Homo sapiens neural proliferation, d... 86 1e-16
AL807752-28|CAI12775.1| 325|Homo sapiens neural proliferation, ... 86 1e-16
AL807752-27|CAI12774.1| 403|Homo sapiens neural proliferation, ... 86 1e-16
AF327349-1|AAL56010.1| 325|Homo sapiens NPDC-1 protein protein. 86 1e-16
AF272357-1|AAF76225.1| 325|Homo sapiens NPDC1-like protein prot... 86 1e-16
AF285836-1|AAK27328.1| 325|Homo sapiens NPDC1 protein protein. 86 1e-16
AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein. 85 2e-16
AK074793-1|BAC11212.1| 325|Homo sapiens protein ( Homo sapiens ... 85 3e-16
AL050221-1|CAB43321.1| 108|Homo sapiens hypothetical protein pr... 80 7e-15
BC016559-1|AAH16559.1| 587|Homo sapiens SAC1 suppressor of acti... 32 1.9
AJ297357-2|CAB95945.1| 542|Homo sapiens KIAA0851 protein protein. 32 1.9
AJ289880-1|CAB96871.1| 426|Homo sapiens KIAA0851 protein protein. 32 1.9
AB020658-1|BAA74874.2| 607|Homo sapiens KIAA0851 protein protein. 32 1.9
X74570-1|CAA52662.1| 329|Homo sapiens gal beta (1-3/1-4) GlcNAc... 31 4.3
L23767-1|AAA16460.1| 332|Homo sapiens a2,3 sialyltransferse pro... 31 4.3
CR456858-1|CAG33139.1| 329|Homo sapiens rase); complete cds, in... 31 4.3
BC010645-1|AAH10645.1| 333|Homo sapiens ST3GAL4 protein protein. 31 4.3
AY040826-1|AAK93790.1| 339|Homo sapiens alpha 2,3-sialyltransfe... 31 4.3
AF525084-1|AAM81378.1| 338|Homo sapiens alpha-2,3-sialyltransfe... 31 4.3
AF516604-1|AAM66433.1| 328|Homo sapiens alpha 2,3-sialyltransfe... 31 4.3
AF516603-1|AAM66432.1| 318|Homo sapiens alpha 2,3 sialyltransfe... 31 4.3
AF516602-1|AAM66431.1| 328|Homo sapiens alpha 2,3-sialyltransfe... 31 4.3
AF035249-1|AAC14162.1| 267|Homo sapiens CMP-N-acetylneuraminate... 31 4.3
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 7.5
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 30 7.5
>BC004217-1|AAH04217.1| 325|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 325
Score = 86.2 bits (204), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AL807752-28|CAI12775.1| 325|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 325
Score = 86.2 bits (204), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AL807752-27|CAI12774.1| 403|Homo sapiens neural proliferation,
differentiation and control, 1 protein.
Length = 403
Score = 86.2 bits (204), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 242 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 297
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 298 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 355
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 356 EENEDGDFTVYECPGLA 372
>AF327349-1|AAL56010.1| 325|Homo sapiens NPDC-1 protein protein.
Length = 325
Score = 86.2 bits (204), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AF272357-1|AAF76225.1| 325|Homo sapiens NPDC1-like protein
protein.
Length = 325
Score = 86.2 bits (204), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AF285836-1|AAK27328.1| 325|Homo sapiens NPDC1 protein protein.
Length = 325
Score = 85.8 bits (203), Expect = 1e-16
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLHREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein.
Length = 287
Score = 85.0 bits (201), Expect = 2e-16
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 126 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 181
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 182 DYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 239
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVY+CPG A
Sbjct: 240 EENEDGDFTVYDCPGLA 256
>AK074793-1|BAC11212.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ90312 fis, clone NT2RP2001276, moderately
similar to NPDC-1 PROTEIN PRECURSOR. ).
Length = 325
Score = 84.6 bits (200), Expect = 3e-16
Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = -2
Query: 549 TNKPHHIHLLE--SGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADV 376
++ P H+ LE G D + +A A AL++A + W L + +
Sbjct: 164 SSDPVHMSPLEPRGGQGDGLALVLILAFCVAGAAALSVA----SLCWCRLQREIRLTQKA 219
Query: 375 DYPAYGVTG-PTVD--SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESD 205
DY G P S GD++LA+SA MYHYQHQ+QQ++ +ER+ + + SD
Sbjct: 220 DYATAKAPGSPAAPRISPGDQRLARSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSD 277
Query: 204 EENEEGDYTVYECPGFA 154
EENE+GD+TVYECPG A
Sbjct: 278 EENEDGDFTVYECPGLA 294
>AL050221-1|CAB43321.1| 108|Homo sapiens hypothetical protein
protein.
Length = 108
Score = 80.2 bits (189), Expect = 7e-15
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -2
Query: 336 SSGDRKLAQSAHMYHYQHQKQQIIAMERNGLDQRHGSMSDPESDEENEEGDYTVYECPGF 157
S GD++LAQSA MYHYQHQ+QQ++ +ER+ + + SDEENE+GD+TVYECPG
Sbjct: 19 SPGDQRLAQSAEMYHYQHQRQQMLCLERH--KEPPKELDTASSDEENEDGDFTVYECPGL 76
Query: 156 A 154
A
Sbjct: 77 A 77
>BC016559-1|AAH16559.1| 587|Homo sapiens SAC1 suppressor of actin
mutations 1-like (yeast) protein.
Length = 587
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 528 HLLESGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADVDYPAYGVTG 349
HLL S+ P F + ++ T + +I G F W +S+R+ A V Y G
Sbjct: 171 HLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRG--- 227
Query: 348 PTVDSSGD-RKLAQSAHMYHYQHQKQQII 265
+DS G ++ + HY K +
Sbjct: 228 --IDSEGHAANFVETEQIVHYNGSKASFV 254
>AJ297357-2|CAB95945.1| 542|Homo sapiens KIAA0851 protein protein.
Length = 542
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 528 HLLESGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADVDYPAYGVTG 349
HLL S+ P F + ++ T + +I G F W +S+R+ A V Y G
Sbjct: 171 HLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRG--- 227
Query: 348 PTVDSSGD-RKLAQSAHMYHYQHQKQQII 265
+DS G ++ + HY K +
Sbjct: 228 --IDSEGHAANFVETEQIVHYNGSKASFV 254
>AJ289880-1|CAB96871.1| 426|Homo sapiens KIAA0851 protein protein.
Length = 426
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 528 HLLESGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADVDYPAYGVTG 349
HLL S+ P F + ++ T + +I G F W +S+R+ A V Y G
Sbjct: 10 HLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRG--- 66
Query: 348 PTVDSSGD-RKLAQSAHMYHYQHQKQQII 265
+DS G ++ + HY K +
Sbjct: 67 --IDSEGHAANFVETEQIVHYNGSKASFV 93
>AB020658-1|BAA74874.2| 607|Homo sapiens KIAA0851 protein protein.
Length = 607
Score = 32.3 bits (70), Expect = 1.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = -2
Query: 528 HLLESGSSDPSDSIFGVALMAAIGTALTMAIXGFAFGWYTLSKRAKAAADVDYPAYGVTG 349
HLL S+ P F + ++ T + +I G F W +S+R+ A V Y G
Sbjct: 191 HLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRG--- 247
Query: 348 PTVDSSGD-RKLAQSAHMYHYQHQKQQII 265
+DS G ++ + HY K +
Sbjct: 248 --IDSEGHAANFVETEQIVHYNGSKASFV 274
>X74570-1|CAA52662.1| 329|Homo sapiens gal beta (1-3/1-4) GlcNAc
alpha-2,3 sialyltransferase protein.
Length = 329
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 233 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 292
Query: 519 E 517
E
Sbjct: 293 E 293
>L23767-1|AAA16460.1| 332|Homo sapiens a2,3 sialyltransferse
protein.
Length = 332
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 236 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 295
Query: 519 E 517
E
Sbjct: 296 E 296
>CR456858-1|CAG33139.1| 329|Homo sapiens rase); complete cds, incl.
stopcodon. protein.
Length = 329
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 233 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 292
Query: 519 E 517
E
Sbjct: 293 E 293
>BC010645-1|AAH10645.1| 333|Homo sapiens ST3GAL4 protein protein.
Length = 333
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 237 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 296
Query: 519 E 517
E
Sbjct: 297 E 297
>AY040826-1|AAK93790.1| 339|Homo sapiens alpha
2,3-sialyltransferase IV type B+18 protein.
Length = 339
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 243 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 302
Query: 519 E 517
E
Sbjct: 303 E 303
>AF525084-1|AAM81378.1| 338|Homo sapiens
alpha-2,3-sialyltransferase IV type A1+18 protein.
Length = 338
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 242 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 301
Query: 519 E 517
E
Sbjct: 302 E 302
>AF516604-1|AAM66433.1| 328|Homo sapiens alpha
2,3-sialyltransferase IV type A1-12 protein.
Length = 328
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 232 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 291
Query: 519 E 517
E
Sbjct: 292 E 292
>AF516603-1|AAM66432.1| 318|Homo sapiens alpha 2,3
sialyltransferase IV type A2-12 protein.
Length = 318
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 222 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 281
Query: 519 E 517
E
Sbjct: 282 E 282
>AF516602-1|AAM66431.1| 328|Homo sapiens alpha
2,3-sialyltransferase IV type A2+18 protein.
Length = 328
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 232 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 291
Query: 519 E 517
E
Sbjct: 292 E 292
>AF035249-1|AAC14162.1| 267|Homo sapiens
CMP-N-acetylneuraminate-beta-galactosamide-
alpha-2,3-sialyltransferase protein.
Length = 267
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 690 VEIA--ELEALPKLEPRQIRQNPNLGKAKALVADDL-DKLKIGLYGDDGSTNKPHHIHLL 520
+EIA +L +LP +PR+I+Q P G +A L D + I +G + NK IH
Sbjct: 179 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY 238
Query: 519 E 517
E
Sbjct: 239 E 239
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 30.3 bits (65), Expect = 7.5
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = -2
Query: 432 GFAFGWYTLSKRAKAAADVDYPAYGVTGPTVDSSGDRKLAQSAHMYHYQHQKQQIIAMER 253
GF FG + +S K + ++ G T SSG K A Y+ I +R
Sbjct: 13 GFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYK------IGSKR 66
Query: 252 NGLDQRHGSMSDPESDEENEEGDY 181
D+ + D E D N + Y
Sbjct: 67 ANFDEENAYFEDEEEDSSNVDLPY 90
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 30.3 bits (65), Expect = 7.5
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = -2
Query: 432 GFAFGWYTLSKRAKAAADVDYPAYGVTGPTVDSSGDRKLAQSAHMYHYQHQKQQIIAMER 253
GF FG + +S K + ++ G T SSG K A Y+ I +R
Sbjct: 13 GFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYK------IGSKR 66
Query: 252 NGLDQRHGSMSDPESDEENEEGDY 181
D+ + D E D N + Y
Sbjct: 67 ANFDEENAYFEDEEEDSSNVDLPY 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,182,890
Number of Sequences: 237096
Number of extensions: 2308054
Number of successful extensions: 5233
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5218
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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