Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I05
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    27   0.18 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.42 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   5.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.9  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 231 GSMSDPESDEENEEGDYTVYECPGFATVRIVVSELRVD 118
           GS+ DP SD +NE G Y V E  G+  +  V+    +D
Sbjct: 243 GSILDPSSDSQNEVGFYEV-EGIGYDFIPTVLDRNVID 279


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 621 QGWDSGGSVEVLI*VKPRVQQF 686
           QG+ + G++EV + V P +QQF
Sbjct: 567 QGYSARGTLEVQVMVPPTIQQF 588


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 360 GVTGPTVDSSGDRKLAQSAHMYH 292
           G+T  TV  +  RKLA S ++ H
Sbjct: 17  GITSVTVRENSPRKLANSMNVIH 39


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -2

Query: 432 GFAFGWYTLSKRAKAAADVDYPAYGVTGPTVDS 334
           G   GW+  S  A  +    YP  G + P+  S
Sbjct: 63  GVELGWFNDSAAAITSTSPSYPGGGSSSPSPSS 95


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 522 ASEYDEVYSWNH 557
           A+ Y +VY WNH
Sbjct: 6   ANYYGDVYQWNH 17


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 439 GHGEGCSYGRHQSNTKNRVGRIRRTGFQQVN 531
           G G+G  +G+    ++ R G   RTGF   N
Sbjct: 79  GRGKGRGHGK--GGSRGRGGNRGRTGFNNKN 107


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 354 TGPTVDSSGDRKLAQSAHMYHYQHQKQQIIA 262
           T P   ++       SA   H+ HQ+QQ +A
Sbjct: 78  TSPAARTTSSMYPYVSAAAAHHHHQQQQAVA 108


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 558 DGSTNKPHHIHLLESGSSDPSDSI 487
           DG+T++P    +L  G+ DP DS+
Sbjct: 311 DGATSEPFPFLMLPLGADDP-DSL 333


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 159 TRGIHKRCNLLLRSPHQIPGPT*SRGVGQVHS 254
           T  ++ +CN L R+P +    +     GQ HS
Sbjct: 348 TETLNTKCNTLERTPSKCSQTSVHYSNGQTHS 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,253
Number of Sequences: 438
Number of extensions: 4795
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)