Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I01
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043698-2|AAB97559.3|  700|Caenorhabditis elegans Hypothetical ...    27   2.7  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    27   4.7  
AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical ...    27   4.7  

>AF043698-2|AAB97559.3|  700|Caenorhabditis elegans Hypothetical
           protein C54G6.2 protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +3

Query: 249 CDKLIILNSLNVEVY 293
           CD+LI+L+S N+E+Y
Sbjct: 551 CDQLIVLDSKNIEIY 565


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 186 LNHRHSSWL*IESEIKFTTNCCD 254
           L+H  + +L +E+E+ F  +CCD
Sbjct: 467 LDHVENQFLTVENEVSFGFDCCD 489


>AF026215-4|AAB71322.1|  843|Caenorhabditis elegans Hypothetical
           protein F09G2.4 protein.
          Length = 843

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 109 FTMKSLLLVLSAQDMLNVR*PQCIIC 32
           FT+K + L  S Q+++ VR P+ ++C
Sbjct: 303 FTLKHVTLCHSHQELMRVRSPKVVLC 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,484,758
Number of Sequences: 27780
Number of extensions: 103856
Number of successful extensions: 173
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)