Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_H24
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 104 9e-23
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 104 9e-23
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 102 3e-22
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 97 1e-20
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 97 1e-20
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 93 3e-19
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 93 3e-19
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 40 0.003
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 36 0.027
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 36 0.027
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 34 0.11
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 34 0.11
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 33 0.25
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 33 0.25
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 32 0.57
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 32 0.57
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.7
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 30 2.3
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 30 2.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 4.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 4.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 4.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 4.0
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF039053-18|AAC25881.2| 495|Caenorhabditis elegans Cytochrome p... 28 7.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 9.3
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 9.3
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 9.3
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 9.3
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 28 9.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 9.3
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 104 bits (249), Expect = 9e-23
Identities = 69/166 (41%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+RK+ EVRKR+EEAS KGF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 462 XXRCGKPKNIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDL 283
R ++D NE L ++ +R+ LE E YD V +K EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 282 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTL 148
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFAL 179
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 104 bits (249), Expect = 9e-23
Identities = 69/166 (41%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+RK+ EVRKR+EEAS KGF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 462 XXRCGKPKNIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDL 283
R ++D NE L ++ +R+ LE E YD V +K EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 282 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTL 148
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFAL 179
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 102 bits (245), Expect = 3e-22
Identities = 65/160 (40%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = -1
Query: 636 KRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 457
K+AEVRKRMEEA+ KGF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 456 RCGKPKNIDDANEAA-LTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLR 280
R ++D N+ L I R+ LEEEK+D V++ EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 279 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKK 160
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 102 bits (245), Expect = 3e-22
Identities = 65/160 (40%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = -1
Query: 636 KRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 457
K+AEVRKRMEEA+ KGF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 456 RCGKPKNIDDANEAA-LTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLR 280
R ++D N+ L I R+ LEEEK+D V++ EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 279 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKK 160
GKFVKPTLKKVSKY+NKF + + NFRN LKVVKK+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKKE 190
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 97.1 bits (231), Expect = 1e-20
Identities = 63/163 (38%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+ K+AEVRKR+EEA KGF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 462 XXRCGKPKNIDDANEAA-LTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVND 286
R N+D ++ L I R+T+LEEEKYD V++ EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 285 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 163
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 97.1 bits (231), Expect = 1e-20
Identities = 63/163 (38%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+ K+AEVRKR+EEA KGF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 462 XXRCGKPKNIDDANEAA-LTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVND 286
R N+D ++ L I R+T+LEEEKYD V++ EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 285 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 163
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 92.7 bits (220), Expect = 3e-19
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 462 XXRCGKPKNIDDANE-AALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVND 286
R N+D ++ A L +I R+ LEEEKYD I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 285 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKK 160
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKE 193
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 92.7 bits (220), Expect = 3e-19
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 642 DRKRAEVRKRMEEASXXXXXXKGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 463
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 462 XXRCGKPKNIDDANE-AALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVND 286
R N+D ++ A L +I R+ LEEEKYD I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 285 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKK 160
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK VKK+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKE 193
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Frame = -1
Query: 438 NIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNS---QV--NDLRGK 274
N + ++ L + I HQRI KLE EKYD E R+ ++ +LN QV N K
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNERQRQVTRNSALKK 1102
Query: 273 FVKPTLKKVSKYENK---FAKLQKKAAEFNFRNQLKVVKKK 160
+ P ++Y K +K ++ NFR + V K+
Sbjct: 1103 GIDPAEVGNTRYPAKVQIVSKYDRQVDRRNFRERRSVFDKR 1143
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 399 ITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDL-RGKFVKPTL 256
I G H RI KLE EKYD E R+ ++ +LN + + R K +K L
Sbjct: 141 IKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 399 ITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDL-RGKFVKPTL 256
I G H RI KLE EKYD E R+ ++ +LN + + R K +K L
Sbjct: 245 IKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKALKKGL 293
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 399 ITGYHQRITKLEEEKYDREMEVARKGLEISDLNS-QVNDLRGKFVKPTL 256
I G H RI KLE EKYD E R+ ++ +L+ Q R K +K L
Sbjct: 236 IRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 399 ITGYHQRITKLEEEKYDREMEVARKGLEISDLNS-QVNDLRGKFVKPTL 256
I G H RI KLE EKYD E R+ ++ +L+ Q R K +K L
Sbjct: 236 IRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 387 HQRITKLEEEKYDREMEVARKGLEISDLNSQ 295
HQRI KLE +KYD E R+ ++ +LN +
Sbjct: 224 HQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 387 HQRITKLEEEKYDREMEVARKGLEISDLNSQ 295
HQRI KLE +KYD E R+ ++ +LN +
Sbjct: 224 HQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3
Query: 430 RRQRSRSDEHHYGLPSAYHQARRGEVRSRDGSGAQRARDLRPELPSQRPQRQIR 269
RR RSRS P + RR RSRD R+RD R P +R +R+ R
Sbjct: 415 RRSRSRSRTRDRRRPRRSNSRRRS--RSRDRQRRSRSRDRRRYSPDRRERRRSR 466
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 438 NIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARK 325
N + ++ L + I HQRI KLE EKYD E R+
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQ 246
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = -1
Query: 387 HQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 208
H+ I K + K R ++ R I +V RGKFV+P + ++ K+ K KL+K
Sbjct: 620 HRLINKKSKHKASRNGKLVR----IKKKTKRVK--RGKFVRPLMPRIPKFVAKKKKLKKV 673
Query: 207 AAEFNFRNQLKVVKKKEFTL 148
+ KV+K+KE L
Sbjct: 674 DGK-------KVLKRKEIVL 686
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 351 DREMEVAR-KGLEISDLNSQVNDLRGKFVKPTLKKVSKYENK 229
D+E + K EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 430 DKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 470
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/95 (26%), Positives = 41/95 (43%)
Frame = -1
Query: 441 KNIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
K + DA EA+ T + Q E + + E E+ RKG ++ ++ + R K
Sbjct: 547 KKLRDA-EASRTDKEQKWKQEKESFERKLAEAEDEIKRKGERFVEMEKEMEEERQKATDR 605
Query: 261 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 157
TLK N L+ E R K+V++K+
Sbjct: 606 TLKLKDALVNSEKNLETIKKESEDRE--KIVREKD 638
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 351 DREMEVAR-KGLEISDLNSQVNDLRGKFVKPTLKKVSKYENK 229
D+E + K EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 432 DKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/95 (26%), Positives = 41/95 (43%)
Frame = -1
Query: 441 KNIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
K + DA EA+ T + Q E + + E E+ RKG ++ ++ + R K
Sbjct: 549 KKLRDA-EASRTDKEQKWKQEKESFERKLAEAEDEIKRKGERFVEMEKEMEEERQKATDR 607
Query: 261 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 157
TLK N L+ E R K+V++K+
Sbjct: 608 TLKLKDALVNSEKNLETIKKESEDRE--KIVREKD 640
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 351 DREMEVAR-KGLEISDLNSQVNDLRGKFVKPTLKKVSKYENK 229
D+E + K EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 432 DKERSLLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/95 (26%), Positives = 41/95 (43%)
Frame = -1
Query: 441 KNIDDANEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
K + DA EA+ T + Q E + + E E+ RKG ++ ++ + R K
Sbjct: 549 KKLRDA-EASRTDKEQKWKQEKESFERKLAEAEDEIKRKGERFVEMEKEMEEERQKATDR 607
Query: 261 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 157
TLK N L+ E R K+V++K+
Sbjct: 608 TLKLKDALVNSEKNLETIKKESEDRE--KIVREKD 640
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -3
Query: 430 RRQRSRSDEHHYGLPSAYHQARRGEVRSRDGSG----AQRARDLRPELPSQRPQRQIRQA 263
RR RSR + + + R+ RSRD R+RD R S+ +R+ ++
Sbjct: 309 RRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRS 368
Query: 262 HTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREKE 161
+K+ + +K+ R E RR + E +E E
Sbjct: 369 RSKDRKRDKKRSRSRSPEKRRDKEDRKTEKKENE 402
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -3
Query: 430 RRQRSRSDEHHYGLPSAYHQARRGEVRSRDGSG----AQRARDLRPELPSQRPQRQIRQA 263
RR RSR + + + R+ RSRD R+RD R S+ +R+ ++
Sbjct: 309 RRSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRS 368
Query: 262 HTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREKE 161
+K+ + +K+ R E RR + E +E E
Sbjct: 369 RSKDRKRDKKRSRSRSPEKRRDKEDRKTEKKENE 402
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 432 DDA---NEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
DDA N+A L + T + ++ +L+ E + K E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKL 744
Query: 261 T 259
T
Sbjct: 745 T 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 432 DDA---NEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
DDA N+A L + T + ++ +L+ E + K E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKL 744
Query: 261 T 259
T
Sbjct: 745 T 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 432 DDA---NEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
DDA N+A L + T + ++ +L+ E + K E +DL + ++DLRG F K
Sbjct: 446 DDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKL 504
Query: 261 T 259
T
Sbjct: 505 T 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 432 DDA---NEAALTSIITGYHQRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKP 262
DDA N+A L + T + ++ +L+ E + K E +DL + ++DLRG F K
Sbjct: 686 DDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKL 744
Query: 261 T 259
T
Sbjct: 745 T 745
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 384 QRITKLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKPTLKKVS 244
+++ K+EEE ++ +EV K ++ L SQ+N + K +P L + S
Sbjct: 612 EKVLKVEEELQEKRLEVLEKEELVNYLQSQINTKQTK--QPKLSRRS 656
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 355 VRSRDGSGAQRARDLRPELPS--QRPQRQIRQAHTKEGFQIRKQIRQAPEEG 206
V+ GS Q R ++P +PS Q QRQI+Q + E Q +I P+ G
Sbjct: 170 VKESPGSQQQTYRVVQPLMPSPSQATQRQIKQMYYNEPVQ---EIHMQPKSG 218
>AF039053-18|AAC25881.2| 495|Caenorhabditis elegans Cytochrome p450
family protein 33C2 protein.
Length = 495
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/48 (25%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -1
Query: 354 YDREMEVARKGLEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQ 214
+++++E R+ ++++DLNS+ D F+K ++ S+ +++ F+ +Q
Sbjct: 245 FNKQIEAHRQEVDLNDLNSESTDFVETFLKEQKRRESEGDSETFSNVQ 292
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -1
Query: 381 RITKLEEEKYDREMEVARKGLEISDLNSQVNDL------RGKFVKPTLKKVSKYENKFAK 220
RI++LEEE + ++ SDL ++ +L +G ++ K E + AK
Sbjct: 1123 RISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAK 1182
Query: 219 LQK--KAAEFNFRNQLKVVKKK 160
L++ + A N NQL ++KK
Sbjct: 1183 LRRDLEEANMNHENQLGGLRKK 1204
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -1
Query: 381 RITKLEEEKYDREMEVARKGLEISDLNSQVNDL------RGKFVKPTLKKVSKYENKFAK 220
RI++LEEE + ++ SDL ++ +L +G ++ K E + AK
Sbjct: 1123 RISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAK 1182
Query: 219 LQK--KAAEFNFRNQLKVVKKK 160
L++ + A N NQL ++KK
Sbjct: 1183 LRRDLEEANMNHENQLGGLRKK 1204
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = -1
Query: 381 RITKLEEEKYDREMEVARKGLEISDLNSQVNDL------RGKFVKPTLKKVSKYENKFAK 220
RI++LEEE + ++ SDL ++ +L +G ++ K E + AK
Sbjct: 1126 RISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELAK 1185
Query: 219 LQK--KAAEFNFRNQLKVVKKK 160
L++ + A N NQL ++KK
Sbjct: 1186 LRRDLEEANMNHENQLGGLRKK 1207
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -1
Query: 372 KLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFN 193
K+++ K ++E V +K E S+ S ++ K K LKK +K E++ +K + +
Sbjct: 164 KVKKSKKNKEKSV-KKRAETSE-ESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKS 221
Query: 192 FRNQLKVVKKK 160
+ KVVKK+
Sbjct: 222 KKKSKKVVKKE 232
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 351 DREMEVARKGL-EISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 178
DRE E RK EI + QV +D+R K + +KK K LQ+K E +
Sbjct: 332 DRERENQRKARHEIGKIRVQVLDDMRKKEKEKDIKKREMERKKRHALQEKKEEAEAAKRR 391
Query: 177 KVVKKKE 157
+ KK E
Sbjct: 392 EARKKHE 398
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -1
Query: 372 KLEEEKYDREMEVARKGLEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFN 193
K+++ K ++E V +K E S+ S ++ K K LKK +K E++ +K + +
Sbjct: 164 KVKKSKKNKEKSV-KKRAETSE-ESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKS 221
Query: 192 FRNQLKVVKKK 160
+ KVVKK+
Sbjct: 222 KKKSKKVVKKE 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,201,351
Number of Sequences: 27780
Number of extensions: 183388
Number of successful extensions: 763
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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