Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_H19
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 285 3e-77
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 283 1e-76
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 274 6e-74
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 109 3e-24
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 91 9e-19
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 91 9e-19
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 91 9e-19
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 47 2e-05
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 35 0.079
Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog p... 28 6.9
AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine r... 28 9.1
AB038044-1|BAB62394.1| 852|Caenorhabditis elegans N-deacetylase... 28 9.1
AB037942-1|BAB61757.1| 814|Caenorhabditis elegans N-deacetylase... 28 9.1
AB037941-1|BAB61756.1| 826|Caenorhabditis elegans N-deactylase/... 28 9.1
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 285 bits (699), Expect = 3e-77
Identities = 130/159 (81%), Positives = 146/159 (91%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E MSYRL T VKPLIWIE+ IERH+HSRV ++IKAKSQFKRRSTANNVEIIIPVP+DADS
Sbjct: 262 ELMSYRLTTVVKPLIWIETSIERHSHSRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADS 321
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVDGKPPIQVKFEI 451
PKFKT+IGSVKYTPEQ+A W+IK+FPGGKEYL+ AH LPSV EE +G+PPI+VKFEI
Sbjct: 322 PKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEI 381
Query: 450 PYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 334
PYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG+Y++R
Sbjct: 382 PYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGEYEMR 420
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 283 bits (694), Expect = 1e-76
Identities = 129/159 (81%), Positives = 145/159 (91%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E MSYRL T VKPLIWIE+ IERH+HSRV ++IKAKSQFKRRSTANNVEIIIPVP+DADS
Sbjct: 262 ELMSYRLTTVVKPLIWIETSIERHSHSRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADS 321
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVDGKPPIQVKFEI 451
PKFKT+IGSVKYTPEQ+A W+IK+FPGGKEYL+ AH LPSV EE +G+PPI+VKFEI
Sbjct: 322 PKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEI 381
Query: 450 PYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 334
PYFTTSGIQVRYLKIIEK GYQALPWVRYITQNG+Y++R
Sbjct: 382 PYFTTSGIQVRYLKIIEKRGYQALPWVRYITQNGEYEMR 420
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 274 bits (671), Expect = 6e-74
Identities = 119/159 (74%), Positives = 141/159 (88%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E MSYRL T VKPLIW+E+ +ERHAHSRVEYM+KAKSQFKR+S AN+VE+IIPVP+D +
Sbjct: 266 ELMSYRLTTQVKPLIWVEAAVERHAHSRVEYMVKAKSQFKRQSVANHVEVIIPVPSDVSA 325
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVDGKPPIQVKFEI 451
PKFKT G+ KY PE NAI WSI+SFPGG+EY+MR+ F LPS+ EE++G+PPI VKFEI
Sbjct: 326 PKFKTGAGTAKYVPELNAIVWSIRSFPGGREYIMRSSFMLPSIGSEELEGRPPINVKFEI 385
Query: 450 PYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 334
PY+TTSG+QVRYLKIIEKSGYQALPWVRY+TQNGDYQ+R
Sbjct: 386 PYYTTSGLQVRYLKIIEKSGYQALPWVRYVTQNGDYQMR 424
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 109 bits (261), Expect = 3e-24
Identities = 47/54 (87%), Positives = 53/54 (98%)
Frame = -1
Query: 495 EEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 334
EE +G+PPI+VKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG+Y++R
Sbjct: 3 EESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGEYEMR 56
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 91.1 bits (216), Expect = 9e-19
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E M YR ++ + ++ + +++E + KS FK A +E+ IP P +
Sbjct: 277 ELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSG 336
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVD--GKPPIQVKF 457
+ G KY +NAI W IK G KE + A L S E +PP+ + F
Sbjct: 337 VQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNF 396
Query: 456 EIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 334
E+P F SG++VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 397 EVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 91.1 bits (216), Expect = 9e-19
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E M YR ++ + ++ + +++E + KS FK A +E+ IP P +
Sbjct: 271 ELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSG 330
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVD--GKPPIQVKF 457
+ G KY +NAI W IK G KE + A L S E +PP+ + F
Sbjct: 331 VQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNF 390
Query: 456 EIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 334
E+P F SG++VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 391 EVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 434
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 91.1 bits (216), Expect = 9e-19
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Frame = -1
Query: 810 EXMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADS 631
E M YR ++ + ++ + +++E + KS FK A +E+ IP P +
Sbjct: 277 ELMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSG 336
Query: 630 PKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEEVD--GKPPIQVKF 457
+ G KY +NAI W IK G KE + A L S E +PP+ + F
Sbjct: 337 VQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNF 396
Query: 456 EIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNGDYQLR 334
E+P F SG++VRYLK+ E S + + WVRYI ++G Y+ R
Sbjct: 397 EVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/114 (26%), Positives = 53/114 (46%)
Frame = -1
Query: 672 NVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECE 493
+V + I +P + + G + + P + W+I GK ++ G +V
Sbjct: 305 DVVLEITMPKCVQNCNLVASHGRIAFDPTTKLLQWTIGKIEVGKPSTLK---GSVAVSGT 361
Query: 492 EVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 331
V PPI +KF+I SG++V L + + Y+ V+YIT+ G + +RT
Sbjct: 362 TVAENPPISLKFKINQLVLSGLKVNRLDMYGEK-YKPFKGVKYITKAGKFTIRT 414
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.079
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1
Query: 681 TANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSV 502
T NNV II+P+P A +P G +Y +N I WS+ F +P+
Sbjct: 408 TLNNVRIIVPLPT-ATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNS-SGTLEFSVPNG 465
Query: 501 ECE 493
C+
Sbjct: 466 HCD 468
>Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical
protein W08D2.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 606 SVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVE-----CEEVDGKPPIQ 466
S Y+ +Q W +F G +YL R H+ E C +DG P Q
Sbjct: 23 SATYSTQQVPYNWLTLAFVGSNDYLPRPHYHSTDREHFKELCRRLDGLNPNQ 74
>AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog
protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 606 SVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVE-----CEEVDGKPPIQ 466
S Y+ +Q W +F G +YL R H+ E C +DG P Q
Sbjct: 23 SATYSTQQVPYNWLTLAFVGSNDYLPRPHYHSTDREHFKELCRRLDGLNPNQ 74
>AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine
receptor, class i protein21 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 385 LVSTFLNNFQISYLNSRSCEIRYFKFYLNW 474
++S F+N I + S+S I F++YL W
Sbjct: 22 IISVFINTLGIYLIKSQSGAIDSFRYYLLW 51
>AB038044-1|BAB62394.1| 852|Caenorhabditis elegans
N-deacetylase/N-sulfotransferase protein.
Length = 852
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = -1
Query: 786 THVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEII 658
T + L+ ++S+ RH + ++ + K QFK + + N+ ++
Sbjct: 74 TDARILVILDSLFSRHGKTIIQILNSQKLQFKAEAVSKNLPVL 116
>AB037942-1|BAB61757.1| 814|Caenorhabditis elegans
N-deacetylase/N-sulfotransferase protein.
Length = 814
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = -1
Query: 786 THVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEII 658
T + L+ ++S+ RH + ++ + K QFK + + N+ ++
Sbjct: 36 TDARILVILDSLFSRHGKTIIQILNSQKLQFKAEAVSKNLPVL 78
>AB037941-1|BAB61756.1| 826|Caenorhabditis elegans
N-deactylase/N-sulfotransferase protein.
Length = 826
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = -1
Query: 786 THVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEII 658
T + L+ ++S+ RH + ++ + K QFK + + N+ ++
Sbjct: 48 TDARILVILDSLFSRHGKTIIQILNSQKLQFKAEAVSKNLPVL 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,467,765
Number of Sequences: 27780
Number of extensions: 329304
Number of successful extensions: 727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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