Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H14
         (826 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0041 - 31242524-31242628,31243219-31243260,31243363-312434...   102   4e-22
06_03_1168 - 28114656-28114721,28114800-28114889,28115139-281168...    32   0.64 
04_04_0393 - 24894170-24894676,24895956-24896627,24897720-248979...    31   0.84 
12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810           31   1.5  
08_02_1029 - 23768228-23768548,23768635-23769519                       30   2.6  
10_01_0016 + 190329-191210,206896-207033,208029-208103,208533-20...    29   4.5  
05_07_0325 - 29272613-29272849,29272903-29273025,29273084-29273149     29   5.9  
04_03_0266 + 13648287-13649099,13649186-13649524                       29   5.9  
01_06_0892 + 32763195-32764149,32764489-32764575,32764665-327648...    29   5.9  
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190...    28   7.8  
05_03_0295 - 11830767-11831309,11831820-11831951,11832322-118323...    28   7.8  

>03_06_0041 -
           31242524-31242628,31243219-31243260,31243363-31243422,
           31243567-31243674,31243792-31243882,31244223-31244408,
           31245088-31245236
          Length = 246

 Score =  102 bits (244), Expect = 4e-22
 Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 17/162 (10%)
 Frame = -3

Query: 680 YSKELKIPHFPDMVFPKNRLTLAH-KSGASINFNPLDALKRVA-STVEPVEVSCSEVWMQ 507
           +  +L+  H P+MVF ++ L+L H ++G  + FN LDALK      + PVEV  +  W  
Sbjct: 51  FEDKLQTTHLPEMVFGESFLSLQHAQTGIRLYFNALDALKAWKHEALPPVEVPAAAKWKF 110

Query: 506 ARPYAEKLKKSFDWTFCTDYKGSIS-----DNITV---------WE-TEESIDFELLKQK 372
               ++++   +D+TF T Y GS +     D+I           WE +E+ ID   L  K
Sbjct: 111 RSKPSDQVILDYDYTFTTPYNGSDALVQNPDSIQTSLDEPRNLCWEDSEDRIDLVALSAK 170

Query: 371 NQILFYHDLTLFEDELHDHGVSKLSVKIRVMPSYWFVLLRYF 246
             ILFY ++ L+EDEL D+G+S L+V++RVMP+ WF+LLR++
Sbjct: 171 EPILFYDEVILYEDELADNGISFLTVRVRVMPTGWFLLLRFW 212


>06_03_1168 - 28114656-28114721,28114800-28114889,28115139-28116877,
            28117146-28117227,28117794-28117865,28119412-28119453,
            28120352-28120401,28121253-28121372,28121635-28121707,
            28121828-28122100,28122413-28122517,28122730-28122859,
            28123106-28123356,28123787-28123993,28124185-28124455,
            28124808-28124914
          Length = 1225

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 364  IWFFCFNSSKSIDSSVSQTVI 426
            IWFFCF+S  SID  +S  V+
Sbjct: 1011 IWFFCFSSVNSIDDLISSDVL 1031


>04_04_0393 -
           24894170-24894676,24895956-24896627,24897720-24897956,
           24898852-24899388,24899612-24899662,24900756-24900767
          Length = 671

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 587 FNPLDALKRVASTVEPVEVSCSEVWMQA 504
           FN +DA KR+   V PV VSCS++ + A
Sbjct: 226 FNVIDAAKRLLEAVCPVTVSCSDILVLA 253


>12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810
          Length = 401

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           N+V+ F H   G   +L ++FFR I + Y I + H+
Sbjct: 53  NEVVVFSHFFYGGFALLTSKFFRGILNFYGISLHHL 88


>08_02_1029 - 23768228-23768548,23768635-23769519
          Length = 401

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           ++V+ F H   G   +L ++FFR I S Y I + H+
Sbjct: 53  HEVVVFSHFFYGGFALLTSKFFRGILSFYGISLHHL 88


>10_01_0016 +
           190329-191210,206896-207033,208029-208103,208533-208639,
           209193-209250,210183-210242,210320-210394,210504-210641,
           211766-211820,212134-212256,212645-212883
          Length = 649

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           ++V+ F H   G   +  +RFFR I S Y I + H+
Sbjct: 53  HEVVVFAHFFYGGFSLPTSRFFRGILSFYGISLHHL 88


>05_07_0325 - 29272613-29272849,29272903-29273025,29273084-29273149
          Length = 141

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -3

Query: 230 VLVRSNETRMFHMLNTDYILREYTSKESSAKDLNMPTSHMKEADD 96
           ++VR     + H L+ D  L   T +  +  +LN+ +S+++ ADD
Sbjct: 85  IVVRPPSPEVKHALHLDTTLTHNTERRHTLINLNLMSSNLRAADD 129


>04_03_0266 + 13648287-13649099,13649186-13649524
          Length = 383

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           ++V+ F H   G   +  +RFFR I S Y I + H+
Sbjct: 29  HEVVVFSHFFYGGFSLPTSRFFRGILSFYGISLHHL 64


>01_06_0892 +
           32763195-32764149,32764489-32764575,32764665-32764829,
           32764904-32766219
          Length = 840

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
 Frame = -3

Query: 563 RVASTVEPVEVSCSEVWMQARPYAEKLKKSFDWTFCTDYKGSISDNITVWE-TEESIDFE 387
           R+ + +EP E  CS           ++ KS D   C     SI +  +V + T  S D  
Sbjct: 156 RMITELEPAEAVCSPKICTDYSILHQVDKSLDKDICHQSDHSIHERYSVLQMTSGSEDEA 215

Query: 386 LLKQKNQILFYHDLTLFEDELHDHGVSK 303
                 +I  +H     E++L++   ++
Sbjct: 216 PCADDGKISHHHKTNCMEEDLNEDATAE 243


>11_03_0184 +
           11317787-11318198,11318337-11318671,11318756-11319048,
           11319125-11319483,11319549-11319748,11319823-11320012,
           11320084-11320188,11320262-11320338,11320428-11320649
          Length = 730

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           ++++ F H   G   +  +RFFR I + Y I + H+
Sbjct: 53  HEIVVFAHFFYGRFSLPTSRFFRGILNFYGISLHHL 88


>05_03_0295 -
           11830767-11831309,11831820-11831951,11832322-11832375,
           11842285-11843169
          Length = 537

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 90  NDVICFLHVGRGHIQILCARFFRSIFS*YVICVKHM 197
           ++++ F H   G   +  +RFFR I S Y I + H+
Sbjct: 53  HEIVVFSHFFYGGFSLPTSRFFRGILSFYGISLHHL 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,052,316
Number of Sequences: 37544
Number of extensions: 389408
Number of successful extensions: 877
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)