Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H14
         (826 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L16621-1|ABD63204.1|  281|Caenorhabditis elegans Hypothetical pr...   164   8e-41
U00065-4|AAA50736.1|  103|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL032656-4|CAB60309.2|  407|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical...    29   5.3  
AF016668-6|AAB66090.1|  275|Caenorhabditis elegans Hypothetical ...    29   5.3  
AF016654-6|AAB66026.1|  426|Caenorhabditis elegans Hypothetical ...    28   7.1  
AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical ...    28   9.3  

>L16621-1|ABD63204.1|  281|Caenorhabditis elegans Hypothetical
           protein ZK688.9 protein.
          Length = 281

 Score =  164 bits (398), Expect = 8e-41
 Identities = 94/237 (39%), Positives = 139/237 (58%), Gaps = 6/237 (2%)
 Frame = -3

Query: 752 ILPSMCATKVVCERDDDQFCQFCTYSKELKIPHFPDMVFPKNRLTLAHKSGASINFNPLD 573
           IL S C      E  +D  C  C Y +ELK+   P+MVF +N LT+      SI FN LD
Sbjct: 38  ILESSCKHS---EDQEDPSCLKCKYDRELKLEERPEMVFARNSLTIQFGRLGSIEFNALD 94

Query: 572 ALKRV-ASTVEPVEVSCSEVWMQARP----YAEKLKKSFDWTFCTDYKGSISDNITVWET 408
           ALK V A  +  V+V  S VW  AR        + +K FDWT+ T YKG+++    V  T
Sbjct: 95  ALKMVCADRLPDVKVGASTVWQSARQDRIQQISEHQKPFDWTYTTHYKGTVT-GCQVTPT 153

Query: 407 EESIDFELLKQKNQILFYHDLTLFEDELHDHGVSKLSVKIRVMPSYWFVLLRYFLRVDDV 228
            E ID E LK++++ILF   +TLFEDEL DHG+++L  ++RVM  Y+FVLLR+++RVD+V
Sbjct: 154 TERIDMERLKRRDEILFSSSITLFEDELADHGIAQLLARVRVMRGYFFVLLRFYMRVDNV 213

Query: 227 LVRSNETRMFHMLNTDYILREYTSKESSAKDL-NMPTSHMKEADDVIPFLPVQGENY 60
           L+R  +TR+       +++RE+  +E+   +L ++    + + D     LPV  E++
Sbjct: 214 LLRVCDTRIVGNEFDGHVIREWQLREAKYGNLGHVDPEELLDVDRAWMHLPVVEEHF 270


>U00065-4|AAA50736.1|  103|Caenorhabditis elegans Hypothetical
           protein D1044.4 protein.
          Length = 103

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 677 SKCRTDKIGRHLSRKPP*WHTYWVVYG*HH 766
           S+C+ + + +H  +  P  HTY ++YG  H
Sbjct: 58  SECKDEDVEKHFEKVMPCVHTYTIIYGNVH 87


>AL032656-4|CAB60309.2|  407|Caenorhabditis elegans Hypothetical
           protein Y106G6E.6 protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 734 ATKVVCERDDDQFCQFCTYSKELKIPHFPDMVFPKNRL-TLAHKSGASINF 585
           A +V+CE   D+F Q+  Y++ L     PD  F  N   ++  + GA+ ++
Sbjct: 257 AVEVLCEGFPDEFAQYLRYARRLDFFETPDYDFCYNLFKSVLDRLGATYDY 307


>Z47357-3|CAA87422.1|  360|Caenorhabditis elegans Hypothetical
           protein ZK1128.3 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -3

Query: 758 SRILPSMCATKVVCERDDDQFCQFCTYSKELKIPHFPDMVFPKNRLTL 615
           +RI  S+C ++V+C  D     Q    ++ +++ H P M  P     L
Sbjct: 240 NRITVSICLSRVICVEDYLSAVQKVMNTRTVQLDHIPSMDLPSLHFAL 287


>AL033514-30|CAA22091.1|  313|Caenorhabditis elegans Hypothetical
           protein Y75B8A.31 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 203 MFHMLNTDYILREYTSKESSAKDLNMPTSHMKEADDVIP 87
           +FH+L T+     Y      AK L + + + KE+DD  P
Sbjct: 268 VFHILETEMTPSNYAEVMEEAKKLVVKSENSKESDDEAP 306


>AF016668-6|AAB66090.1|  275|Caenorhabditis elegans Hypothetical
           protein F36H9.2 protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -3

Query: 710 DDDQFC--QFCTYSKELKIPHFPDM 642
           DDD FC  QFC YS++L    F D+
Sbjct: 112 DDDNFCFGQFCRYSRQLVPNDFGDV 136


>AF016654-6|AAB66026.1|  426|Caenorhabditis elegans Hypothetical
           protein C17A2.2 protein.
          Length = 426

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 284 VMPSYWFVLLRYFLRVDDVLVRSNETRMFHMLNTDYILREYTSKE 150
           VM  Y   +L Y   VDD  + S + R   +L T+ + +EY  K+
Sbjct: 265 VMTDYPGTILNYIREVDDEKIGSLKFRQQWILKTELMPQEYEGKD 309


>AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical
           protein F42G8.7 protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -3

Query: 500 PYAEKLKKSFDWTFCTDYKGSISDNITVWETEESIDFELLKQKNQILFYHDLTLF 336
           P++ KL  SF      DY+    D  TVW   + +  + L  K  I  +  + +F
Sbjct: 27  PFSRKLMSSFSQA-AADYQAKYPDRKTVWGNVDCMAEDYLMNKYSITKFPTMKVF 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,124,582
Number of Sequences: 27780
Number of extensions: 374319
Number of successful extensions: 888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)