Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H13
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0030 + 9089087-9089207,9090406-9090533,9090897-9090954,909...    30   2.1  
07_03_1089 - 23879483-23881909                                         29   6.3  
04_01_0072 - 784922-785567,785673-786406                               29   6.3  

>11_03_0030 +
           9089087-9089207,9090406-9090533,9090897-9090954,
           9091055-9091096,9091678-9091796,9092187-9092253,
           9092616-9092707,9092966-9093025,9093026-9093163,
           9093242-9093346,9093450-9093533,9093699-9093823,
           9094160-9094202
          Length = 393

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/44 (29%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
 Frame = -2

Query: 758 ATIATHVITASTVTNVRTETIHIVIQVTGLNIRTE--MVPEVED 633
           ++++  +     V ++R++ +  V++VTG NI+ E  +VP++ED
Sbjct: 49  SSVSFDLTKTEAVASMRSKNVKRVLEVTGENIKKEVDIVPDIED 92


>07_03_1089 - 23879483-23881909
          Length = 808

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 513 IRL-PTYV*CTALPINKA--TTSCLWGEACPRPRLSDTINCGDVLDLGNHLGPYVEA 674
           IRL P +V   ALP+N A  T     G+     R+ DT+N  DV+     L  Y+++
Sbjct: 327 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 383


>04_01_0072 - 784922-785567,785673-786406
          Length = 459

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 289 TRRGQ*NRGLYFQIRGLNQYNIVIFITRNFR 197
           TRRG+ N G Y    G + Y  VIF++ + R
Sbjct: 379 TRRGRYNSGGYIDFLGFHPYKEVIFLSDSLR 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,126,369
Number of Sequences: 37544
Number of extensions: 361075
Number of successful extensions: 762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)