Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_H10
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 257 1e-69
SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr... 161 1e-40
SPAPB24D3.01 ||SPAPB2C8.02|transcription factor |Schizosaccharom... 30 0.31
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 0.95
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 2.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.1
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 26 6.7
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 6.7
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 6.7
SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3 |Schizosacc... 26 6.7
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 6.7
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 25 8.9
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.9
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 25 8.9
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 257 bits (629), Expect = 1e-69
Identities = 120/207 (57%), Positives = 151/207 (72%), Gaps = 2/207 (0%)
Frame = -2
Query: 757 TSEQPIXAFHRDEWL--PESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFV 584
TSEQPI A+H EW P LP+KYAG STC+R+E GSHGRD GIFRVH FEK+EQFV
Sbjct: 238 TSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFV 297
Query: 583 LTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGA 404
LT P SW+ EMIN+AE+F K+L LPYR+V IVSGALN+AA+KK DLEAWFP G
Sbjct: 298 LTDPEK--SWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQGE 355
Query: 403 FRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTED 224
++ELVSCSNC +YQ+R L +R G K + +YVH LN+T+CAT R +C ILE +QT D
Sbjct: 356 YKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTPD 415
Query: 223 GIKVPEILKPWLPKQYQELIPFVKPAP 143
G+ VP++L+P++ + +PF K P
Sbjct: 416 GVNVPKVLQPYMGG--KTFLPFTKELP 440
>SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 454
Score = 161 bits (390), Expect = 1e-40
Identities = 79/173 (45%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
Frame = -2
Query: 691 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWQMMDEMINNAEEFC 512
K G+S +R+E G+ G++ RG++R+H+F KVE F T H + S +M +E++N +EF
Sbjct: 283 KVVGVSRAYRREAGARGKENRGLYRLHEFTKVELFAWT--HPSRSSEMFNEIVNFQKEFV 340
Query: 511 KALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQ 332
+ L +P R++N+ + L +AS+K D+EAW P ++ E+ S SNCLEYQARRLL RY
Sbjct: 341 ETLKIPARILNMPTAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRLLTRYRN 400
Query: 331 TKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG-IKVPEILKPWLPKQY 176
K + +VH LN T A R+I AILE HQ EDG +KVPE L P++ K+Y
Sbjct: 401 DKD----SGFVHTLNGTAAAIPRLIIAILENHQQEDGTVKVPETLVPYIHKEY 449
>SPAPB24D3.01 ||SPAPB2C8.02|transcription factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 594
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -2
Query: 400 RELVSCSNCLEYQ-----ARRLLVRYGQTKKMN 317
REL SC NC+ YQ ++RL Y TKK N
Sbjct: 23 RELPSCQNCIVYQEECHYSKRLKRSYSATKKKN 55
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 28.7 bits (61), Expect = 0.95
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 220 IKVPEILKPWLPKQYQELIP 161
+ + +L+PWLP + QE++P
Sbjct: 289 VAIVRVLRPWLPSKLQEVLP 308
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 448 SKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRY 338
SKKL+ E W P +F E++ ++ LE +++ L V +
Sbjct: 1394 SKKLEEEYWLPFLLSFNEIICEASDLEVRSKALKVLF 1430
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 5.1
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +3
Query: 390 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNS-SALFIISSIICQDAL 566
+SSL++ DP ++ SS + P T+ SA S S+ ++ SS + +
Sbjct: 161 SSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSS 220
Query: 567 S*GDVRTNCSTFSN*CTRKIPRVSRP*DPTS 659
S ++ T S+ T IP S TS
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTS 251
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 454 AASKKLDLEAWFPGSGAFRELV 389
+A+KK ++ W PGSG ++V
Sbjct: 156 SAAKKYGIQFWGPGSGIIHQIV 177
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 708 NHLFPSNMRDSPHASDKRLDLMDVTRVVSFEYI 610
N L N+ +SP S+KR+ ++D + ++ E++
Sbjct: 30 NELKNQNLFESPAESEKRVKVLDELQQITTEFV 62
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 390 TSSLNAPDPGNQASKSSFLEAAWFRAPDTMFTTRYGSPSALQNSSALFIISSIICQDALS 569
T + P P + S S + + FTT GSP N+S+ F+ SS+I +LS
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSP--YYNTSS-FLPSSVISSASLS 240
>SPBC691.03c |apl3||AP-2 adaptor complex subunit Alp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 173 LILLRKPRFQDFRYLDAV--LCLVYFEYG 253
LI++R+P++Q F Y AV L + FE+G
Sbjct: 207 LIVIREPKYQKFAYGKAVGKLKNIVFEHG 235
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 654 TSC-LKHVESPAYLMGRDDSGSHSSLW 731
TSC H SP +MGR G S +W
Sbjct: 166 TSCGSPHYASPEIIMGRSYDGCASDIW 192
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 547 SFAKMRYHEEMLEQIVPPFQIDVLERYHACHVHEIQPL 660
+ A R HE+ L + P +D R HA H+++ L
Sbjct: 19 TLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQL 56
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 189 SQGFRISGTLMPSSVWCTSSMAQMTLVVAHMVAFSMCTYSVAAFIF 326
++GFRI GTL+ S V +S + V AFS+ + +FI+
Sbjct: 64 NEGFRIEGTLLESLVESVTSASNYPKV----NAFSLMCSGIPSFIW 105
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 296 HAERDHVRHHQGHLRHTRSTPDRGRHQ 216
H E H RH + +R DR RH+
Sbjct: 35 HRESKHGRHDRSERPSSREAGDRSRHE 61
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,217,923
Number of Sequences: 5004
Number of extensions: 65986
Number of successful extensions: 208
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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