Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H10
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    25   3.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.3  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = -1

Query: 365 PSQKIACKVRSDEKDERGH*IRAHAERDHVRHHQGHL---RHTRSTPDRGRHQG 213
           P       + S++++++ H ++   ++   +HHQ H    +H       G H G
Sbjct: 618 PDPNFNPNIFSEDEEDQQHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHHG 671


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
 Frame = -2

Query: 457 HAASKKLDLEAWFPGSGAFRELVSCSNCLEYQA-----RRLLVRYGQTKKMNAATEYVHM 293
           H   K  D    + G G F        CL +Q       RLL RY   +    AT YVH+
Sbjct: 179 HVCPKGHDGALAYFGYGNFT--ADAFTCLHFQGSAMLLHRLLERYRPGRPR--ATRYVHV 234

Query: 292 LNA 284
           LNA
Sbjct: 235 LNA 237


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -2

Query: 622 FRVHQFEKVEQFVLT 578
           FR+H+  KV+QFV++
Sbjct: 585 FRIHKLTKVDQFVMS 599


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +2

Query: 539 FVHHLPRCVIMRR 577
           F++HLP+ ++MRR
Sbjct: 344 FINHLPKLLVMRR 356


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = -1

Query: 374  SGVPSQKIACKVRSDEKDERGH*IRAHAERDHVRHHQGHLRHTRSTPDRGRHQGT 210
            SG P+ K   ++ SDE+D  G        R   R   G    +RS    G   G+
Sbjct: 1040 SGAPATKRKRRIASDEEDSDG-----SQRRSRSRSRSGSGSRSRSRSGSGSRAGS 1089


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,278
Number of Sequences: 2352
Number of extensions: 17285
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)