Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H06
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   1.0  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   1.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.2  

>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 323 TDIMCREGKHTALQEVLPGED 385
           T++   E  H ALQE +PG++
Sbjct: 230 TEVKSVEMHHEALQEAVPGDN 250


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 323 TDIMCREGKHTALQEVLPGED 385
           T++   E  H ALQE +PG++
Sbjct: 287 TEVKSVEMHHEALQEAVPGDN 307


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 19  ISWCHPLCQHTYQQLEDGAYGATVLKLILSLQMLPNSFFF 138
           I+ CHP   HT  +L        V+ L+     +P +  F
Sbjct: 154 IAICHPFISHTMSKLSRAVKFIIVIWLLALCLAVPQAIQF 193


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 139 SKKKILPIKQSFCIIKQRCRLSISS 213
           S + I P    +C I + C LS +S
Sbjct: 75  SSRSIDPCASKYCGIGKECELSPNS 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,424
Number of Sequences: 438
Number of extensions: 2162
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)