Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_H05
(840 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.02c |||electron transfer flavoprotein beta subunit |Sch... 187 1e-48
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 39 0.001
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 31 0.15
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 29 0.82
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.5
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 27 4.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.4
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 4.4
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 26 7.6
SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|... 26 7.6
>SPAC1805.02c |||electron transfer flavoprotein beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 187 bits (456), Expect = 1e-48
Identities = 100/243 (41%), Positives = 147/243 (60%), Gaps = 2/243 (0%)
Frame = -2
Query: 824 SIXYAVKIRVKPDKSGVVTDGVKHSMNPFDEIAVEEAVRMKE--KKLASEVIAVSCGPSQ 651
++ Y +K R+ K+ V G K S+NPF +IAVEEA+RMKE K + + V+ G +
Sbjct: 13 TLDYMLKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETLKNRIEDTLVVTAGQTS 72
Query: 650 AQETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDD 471
++ LR LA G RA + V E L+P+ VAK+L + EK++LV++GKQAIDDD
Sbjct: 73 SEPILRQCLAKGIGRAALINVGEKE---LEPLSVAKLLKATVEKEKSNLVLLGKQAIDDD 129
Query: 470 SNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGGLEVIKTKIPAVLSADLRLNEP 291
++QT M AA+L WPQ T ASK+ + +TREIDGG E + + +PA+++ DLRLN P
Sbjct: 130 AHQTGGMLAAMLGWPQFTSASKVRIEGDKVIVTREIDGGEETLSSTLPAIITTDLRLNVP 189
Query: 290 RYATLPNIMXXXXXXXXXXXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLK 111
R+A L +M +DLGV + R++ VSV +P ++ ++ VD +V LK
Sbjct: 190 RFANLAKVMKARKAPLGKMSPEDLGVTIDQRLQTVSVSEPVQKRQNIMVKSVDEMVKTLK 249
Query: 110 EGG 102
E G
Sbjct: 250 ELG 252
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 38.7 bits (86), Expect = 0.001
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 5/228 (2%)
Frame = +1
Query: 70 SIXSSXXASTCPPSLSLATSVSTSGMMEPACRTGGSSTETTLIRGARSTPRSLALTFLRG 249
SI SS AS+ S SLA+S + S + SS+ ++ +T SLA + L
Sbjct: 143 SITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNS 202
Query: 250 FFFAFMMLGSVAYRGSFSRRSALSTAGIFVLITSKPPSISRVIVRAPSVFSIFDANVPCG 429
+ A S S +A ++A L +S S + + S+ S ++ P
Sbjct: 203 ------TTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLT 256
Query: 430 QSNKAAVICAVWLESSS-----MACLPTITKSAFSSCDSFAKIFAT*MGCNVSYSAPATS 594
SN + SSS + LP+ T S+ + S AT S +T+
Sbjct: 257 SSNSTTAATSASATSSSAQYNTSSLLPSSTPSS-TPLSSANSTTATSASSTPLTSVNSTT 315
Query: 595 T*IARSAPIARAVLRVSCACDGPQETAMTSLANFFSFIRTASSTAISS 738
T A S P++ S T ++S+ + + +ASST ++S
Sbjct: 316 TTSASSTPLSSVSSANSTTATSTSSTPLSSVNS--TTATSASSTPLTS 361
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.5 bits (68), Expect = 0.15
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Frame = +1
Query: 295 SFSRRSALSTAGIFVL-ITSKPPSISRVIVRAPSVFSIFDANVPCGQSNKAAVICAVWLE 471
SF++ S+LS++ + TS S+S + A S S +P S+ ++
Sbjct: 504 SFTKFSSLSSSQLSTENFTSASSSLS--LTNAKSSLSTPSTTIPTSNSS-----VSLQTS 556
Query: 472 SSSMACLPTITKSAFSSCDSFAKIFAT*MGCNVSYSAPATST*IARSAPIARAVLRVSCA 651
SS + P I+ S ++ S + + N SY TS+ I S+ + L C+
Sbjct: 557 SSLIISSPIISSSLTATSTSTPALTHSITPSNTSY----TSSLIPSSSTDYSSSLITVCS 612
Query: 652 CDGPQETAMTSLANFFSFIRTASSTAISSKGFIECFTPSVTTPDLSGFTRIFTAXS 819
+ E + TSLA+ S + + ++ S F+ T TT GFT S
Sbjct: 613 -NVTSEISSTSLASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSVGFTTTLATQS 667
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 29.1 bits (62), Expect = 0.82
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 392 QSFL-SLMQMCLVANLIKQQSSVLSGWSHHL 481
Q FL SL C++ IK S++ W+HHL
Sbjct: 73 QIFLFSLFGSCMLFRFIKYPSTIKDSWNHHL 103
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.5
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Frame = +1
Query: 73 IXSSXXASTCPPSLSLATSVSTSGMMEPACRTGGSSTETTLIRGARSTPRSLALTFLRGF 252
I SS ST S+S S STS + SST +T + S+P S++ +
Sbjct: 564 ISSSSIPSTFS-SVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSS 622
Query: 253 FF---------AFMMLGSVAYRGSFS-RRSALSTAGIFVLITSKPPSI---SRVIVRAPS 393
+ M+ S GS S S++ST I +++ S+ S +V + S
Sbjct: 623 TILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSS 682
Query: 394 VFSIFDANVPCGQSNKAAVICAVWLESSSMACLPTITKSAFS-SCDSFAKIFAT*MGCNV 570
S+ ++ P S+ + + + L S+ A L IT S+ S + S + T + +
Sbjct: 683 --SLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSST 740
Query: 571 SYSAPATST---*IARSAPIARAVLRVSCACDGPQETA--MTSLANFFS-----FIRTAS 720
+A +++T I S+ I + + + + P TA + L N + ++ ++S
Sbjct: 741 LITASSSNTLLSSITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSS 800
Query: 721 STAISSKGFIECFTPSVTTPDLSGFTRIFTAXSI 822
S IS+ E + S P +S T + S+
Sbjct: 801 SRTISTSSTNE-YNTSFHAPTVSSTTSSSSTTSL 833
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 358 PSISRVIVRAPSVFSIFDANVPCGQS 435
PS+S V RAP FS +ANVP G++
Sbjct: 285 PSMSYVY-RAPESFSSINANVPYGRN 309
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 4.4
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 460 VWLESSSMACLPTITKSAFSSCDSFAKIFAT*MGCNVSYS-APATST*IARSAPIARAVL 636
V + SSS++ +T S FSS S + S + + A T + S + +V+
Sbjct: 157 VSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVV 216
Query: 637 RVSCACDGPQETAMTSLANFFSFIRTASSTAISSKGFIECFTPSVTTPDLSGFTRIFTAX 816
S + + +TS + S I + SS++ S+ + + S T S + I ++
Sbjct: 217 SSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSS 276
Query: 817 S 819
S
Sbjct: 277 S 277
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 472 SSSMACLPTITKSAFSSCDSFAKIFAT*MGCNVSYSAPATST*IARSAPIARAV 633
SSS + PTIT+S+ S+ S N SYS+P +S + S I ++
Sbjct: 781 SSSSSATPTITQSSISTSVSSQS------SMNSSYSSPISSNSVTSSTSIISSI 828
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 343 ITSKPPSISRVIVRAPSVFSIFDANVPCGQSNKAAVI 453
ITS P+ S++ VR + S FD ++P G S A I
Sbjct: 143 ITSSTPTPSQLPVRPSTSLSFFD-DIPLGPSFSAETI 178
>SPBC25H2.09 |||DUF1690 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = -2
Query: 656 SQAQETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAID 477
SQ + LR H++ + E DT + + + + K QDE L + K+AID
Sbjct: 6 SQPEFVLRAPTEFSEKFVRHLQES-TETDTSRYMDMENYIQKRVQDELKQLQLRQKKAID 64
Query: 476 DDSNQTAQMTAALLDWPQGTFASKI 402
+ + A + QG+ S +
Sbjct: 65 AIQEEEWKSNAKTIKDSQGSLDSNL 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,355,094
Number of Sequences: 5004
Number of extensions: 67647
Number of successful extensions: 212
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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