Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H05
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.8  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   6.6  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    24   6.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   8.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +1

Query: 82   SXXASTCPPSLSLATSVSTSGMMEPACRTGGSSTETTLIRGARSTPRSLALTFL 243
            S  ++  P +L+L    S +G     C  G SS   +    ARSTP+   L F+
Sbjct: 869  STMSAGMPLNLNLNLDRSEAGGRS-LCTNGSSSGRDSQPSSARSTPKKQNLKFI 921


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 601 IARSAPIARAVLRVSCACDG---PQETAMTSLANFFSFIRTASSTAI 732
           I R   +AR +  V   CD    P + A TSLA    +++ ASS  +
Sbjct: 318 IERIFELARTLQLVVLDCDTINHPSQLAKTSLAPTIVYLKIASSKVL 364


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -3

Query: 631 LLLRWVQIELFMLKWLGLNMTHYSPFMLQKS*QN 530
           L  +W+++EL +++   L   HY P  L+ + Q+
Sbjct: 20  LFAKWLKLELNLIELDVLKRDHYKPEFLKLNPQH 53


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 430 QSNKAAVICA-VWLESSSMACLPTITKS 510
           Q++   V C+ +W   SSM C P  T S
Sbjct: 58  QASTCPVPCSSIWSRPSSMRCAPARTAS 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,105
Number of Sequences: 2352
Number of extensions: 16211
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)