Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_H05
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106583-2|AAD03129.2| 255|Caenorhabditis elegans Hypothetical ... 304 5e-83
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF025472-5|AAB71076.1| 423|Caenorhabditis elegans Hypothetical ... 29 4.1
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical ... 28 7.2
>AF106583-2|AAD03129.2| 255|Caenorhabditis elegans Hypothetical
protein F23C8.5 protein.
Length = 255
Score = 304 bits (746), Expect = 5e-83
Identities = 150/245 (61%), Positives = 184/245 (75%), Gaps = 1/245 (0%)
Frame = -2
Query: 821 IXYAVKIRVKPDKSGVVTDGVKHSMNPFDEIAVEEAVRMKEKKLASEVIAVSCGPSQAQE 642
+ YAVKIRVKPD+SGVVT+GV+HSMNPFDEIA+EEAV++KEKKLA+EV+A S G ++ E
Sbjct: 11 VDYAVKIRVKPDRSGVVTEGVQHSMNPFDEIALEEAVKLKEKKLATEVVAFSLGGPKSAE 70
Query: 641 TLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQ 462
LRTALA GAD+A+HV+V AE L+ HVAK L K+ + EK D V +GKQAIDDDS+Q
Sbjct: 71 VLRTALAKGADKAVHVQVTDAEAGKLESFHVAKALQKIVEQEKFDAVFLGKQAIDDDSSQ 130
Query: 461 TAQMTAALLDWPQGTFASKIEKTD-GALTITREIDGGLEVIKTKIPAVLSADLRLNEPRY 285
TA + A LL+WPQ +ASK+E G + +TREIDGGL+ IK K+P VLSADLRLNEPRY
Sbjct: 131 TAPILAGLLEWPQALYASKVEDAGAGHMKVTREIDGGLDTIKVKVPFVLSADLRLNEPRY 190
Query: 284 ATLPNIMXXXXXXXXXXXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEG 105
ATLPNIM KDL VD+ P+ + + V +PPVRQAG + DV LVAKLKE
Sbjct: 191 ATLPNIMKAKKKPLKNIPIKDLNVDITPQTETLEVTEPPVRQAGGFVDDVSALVAKLKEK 250
Query: 104 GHVEA 90
G V+A
Sbjct: 251 GFVKA 255
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 768 RW-GEALNESF**NSSRGGCSNERK--KVSKRSHCSLLWTITSTGNSQNCSCDGCRSSYS 598
RW ++ E+F N + C ++ +S++ L+ T +S NS CS C + Y
Sbjct: 135 RWVRKSCQENFLFNFEQQTCIVPKRMSSLSRQQASGLVCTFSSCSNSNPCSVGTCNNGYC 194
Query: 597 C*SG 586
C SG
Sbjct: 195 CSSG 198
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 768 RW-GEALNESF**NSSRGGCSNERK--KVSKRSHCSLLWTITSTGNSQNCSCDGCRSSYS 598
RW ++ E+F N + C ++ +S++ L+ T +S NS CS C + Y
Sbjct: 135 RWVRKSCQENFLFNFEQQTCIVPKRMSSLSRQQASGLVCTFSSCSNSNPCSVGTCNNGYC 194
Query: 597 C*SG 586
C SG
Sbjct: 195 CSSG 198
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = -2
Query: 698 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 522
KK + V+ G + + +L+ A A+ V++A A +D A +K ++
Sbjct: 254 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 312
Query: 521 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 354
+ + ++ GK AID+ SN+ + +++ P+ F ++ E + ++ +GG
Sbjct: 313 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 367
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = -2
Query: 698 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 522
KK + V+ G + + +L+ A A+ V++A A +D A +K ++
Sbjct: 315 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 373
Query: 521 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 354
+ + ++ GK AID+ SN+ + +++ P+ F ++ E + ++ +GG
Sbjct: 374 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 428
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = -2
Query: 698 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 522
KK + V+ G + + +L+ A A+ V++A A +D A +K ++
Sbjct: 279 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 337
Query: 521 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 354
+ + ++ GK AID+ SN+ + +++ P+ F ++ E + ++ +GG
Sbjct: 338 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 392
>AF025472-5|AAB71076.1| 423|Caenorhabditis elegans Hypothetical
protein ZK250.7 protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -2
Query: 215 VDLAPRIKVVSVEDPPVRQAGSIIPDVDTLVAKLKEGGHV 96
+D+ R+K++ V+D P + ++ ++ +KEGG +
Sbjct: 254 IDVEVRVKIIEVKDVPCLEKSFVLSHTIKNMSNIKEGGSI 293
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 669 LLWTITSTGNSQNCSCDGCRSSYSC*SG 586
L+ T +S NS CS C + Y C SG
Sbjct: 685 LVCTFSSCSNSNPCSVGTCNNGYCCSSG 712
>AF040652-5|AAB95022.2| 378|Caenorhabditis elegans Hypothetical
protein T05A8.5 protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 380 LEHHQSFLSLMQMCLVANLIKQQSSVLSGWSHHL 481
L H+Q+ L+ ++ L LI+Q S +SG SH L
Sbjct: 344 LIHYQAKLTAQRVILDVQLIQQHSMAMSGSSHAL 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,853,295
Number of Sequences: 27780
Number of extensions: 398918
Number of successful extensions: 1170
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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