Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H04
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    27   0.48 
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   5.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.8  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 381 NISVPRAWYLTVQSPV-INYTNKILVSNHRPRRNKQ 277
           +I++ R W  +V+  + I+ T  ILVS+HR R+  Q
Sbjct: 665 SINIIRQWMESVELQLNISKTEYILVSSHRSRQESQ 700


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 421 HSEMNCGTCRSDPKYKCPTC 362
           H + NCG C  D  +  P C
Sbjct: 39  HGQCNCGRCSCDESFFGPFC 58


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 421 HSEMNCGTCRSDPKYKCPTC 362
           H + NCG C  D  +  P C
Sbjct: 39  HGQCNCGRCSCDESFFGPFC 58


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 421 HSEMNCGTCRSDPKYKCPTC 362
           H + NCG C  D  +  P C
Sbjct: 39  HGQCNCGRCSCDESFFGPFC 58


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 421 HSEMNCGTCRSDPKYKCPTC 362
           H + NCG C  D  +  P C
Sbjct: 39  HGQCNCGRCSCDESFFGPFC 58


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 421 HSEMNCGTCRSDPKYKCPTC 362
           H + NCG C  D  +  P C
Sbjct: 615 HGQCNCGRCSCDESFFGPFC 634


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -1

Query: 346 SVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVP 224
           + A YK  K  P      PPK  I +     N+ P    +P
Sbjct: 53  TTAAYKAGKIAPNPFTAGPPKPNISIPPPTMNMPPRPGMIP 93


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +1

Query: 445 NLCTYC----HLIKRVYSYFHNIFLAYFLSVTYLFRLFGIFYVPNSVLFFVIVL 594
           NL TY       IK + S+F ++  +YF   T+L  LF +  V  SVL  V ++
Sbjct: 126 NLATYLIPWESRIKEIESHFGSVVASYF---TFLRWLFSVNIV-ISVLLVVFIM 175


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 304  KPPSPPKQTIGV 269
            +P SPP QTIG+
Sbjct: 1388 QPSSPPTQTIGI 1399


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,571
Number of Sequences: 2352
Number of extensions: 13188
Number of successful extensions: 72
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)