Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H04
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021180-2|CAA15981.2|  188|Caenorhabditis elegans Hypothetical ...    41   8e-04
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    37   0.013
U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     30   1.5  
Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81540-2|CAB04403.1|  190|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U41533-1|AAA83162.2|  357|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z82085-4|CAB04986.1|  249|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U28731-2|AAA68297.1|  658|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta p...    28   6.1  
AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine re...    28   6.1  
Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    27   8.1  

>AL021180-2|CAA15981.2|  188|Caenorhabditis elegans Hypothetical
           protein F43C1.3 protein.
          Length = 188

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 424 THSEMNCGTCRSDPK--YKCPTCMVPYCSVACYKLHKQNPC 308
           T S + CG C  + +  YKCP C + YC++ CY+  K + C
Sbjct: 3   TSSFLACGICGVEKREPYKCPRCDLLYCTIKCYRNPKHSEC 43


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 406 CGTC-RSDPKYKCPTCMVPYCSVACYKLHK-QNPC 308
           C  C +++ KYKCP C +  CS+ C K HK  N C
Sbjct: 84  CKVCLKNEHKYKCPRCEMRTCSLDCSKKHKADNNC 118


>U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical
           protein M01H9.2 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -1

Query: 400 TCRSDPKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPL 221
           TC ++ K  C   +  YC   C K + +   +KP S   +TI V Q   N   T  T   
Sbjct: 60  TCSAERKKDCDDMLSDYCPRLCGKCYAK---LKPDSKRTKTIPVTQFKRNPAATSTTTTT 116

Query: 220 DR 215
            R
Sbjct: 117 TR 118


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
           protein K04B12.1 protein.
          Length = 1764

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -1

Query: 406 CGTCRSDPKYKCPTCM-VPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDT 230
           C +C S  +Y C  C  +  CS +C  L K   C+K   P +  I +    E +    + 
Sbjct: 582 CSSCMSS-EYNCAWCSGLHKCSNSCGALEKSKACVK-IQPMRLPIAIGSQQEIVLEASNL 639

Query: 229 VPLDR 215
             LDR
Sbjct: 640 DTLDR 644


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -1

Query: 406 CGTCRSDPKYKCPTCM-VPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDT 230
           C +C S  +Y C  C  +  CS +C  L K   C+K   P +  I +    E +    + 
Sbjct: 584 CSSCMSS-EYNCAWCSGLHKCSNSCGALEKSKACVK-IQPMRLPIAIGSQQEIVLEASNL 641

Query: 229 VPLDR 215
             LDR
Sbjct: 642 DTLDR 646


>Z70038-7|CAA93886.2|  373|Caenorhabditis elegans Hypothetical
           protein ZK1067.7 protein.
          Length = 373

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -1

Query: 439 IKFQPTHSEMNCGTCRSDPKYKCPTC-MVPYCSVAC 335
           +  QP  ++  CG+C+S  +  CPTC     C+ AC
Sbjct: 141 VVLQPQQNQ--CGSCQSSCQQTCPTCNCQSACAPAC 174


>Z81540-2|CAB04403.1|  190|Caenorhabditis elegans Hypothetical
           protein F46B3.2 protein.
          Length = 190

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -1

Query: 457 KYTNCPIKFQPTHSEMNCGTCRSDPKYKCPTCMV-PYCSVACYKLHKQNPCIK 302
           ++ +C   F     +  CG C+ DP     TC V P     C     Q  C K
Sbjct: 46  QFRSCDKSFLAKKKKYTCGLCKKDPNVCSDTCTVCPMDMSPCETDQYQKICPK 98


>U41533-1|AAA83162.2|  357|Caenorhabditis elegans Hypothetical
           protein R05F9.7 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 481 YSYFHNIFLAYFLSVTYLFRLFGIFYVPNSVLFFVIVL 594
           ++YF   F    L++ YLF LF   Y+  S+  F ++L
Sbjct: 68  FNYFVKSFQIVHLNLQYLFLLFTTLYIFGSLARFYMIL 105


>Z82085-4|CAB04986.1|  249|Caenorhabditis elegans Hypothetical
           protein ZK218.5 protein.
          Length = 249

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 406 CGTCRSDPKYKCPTCMVPYCSVA 338
           CG C   P YKCP    P  + A
Sbjct: 108 CGYCCESPDYKCPNVQFPRLNCA 130


>Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical
           protein T22A3.5 protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = -1

Query: 286 KQTIGVKQAVENLYPTEDTVPLDRLNLLENST---EVKKCLENPHVREILELLDSSANPD 116
           K   GV++ +EN    ++T P+   N++E+S    E+   L++P   +I E+   SAN  
Sbjct: 50  KMEEGVEETMENASVVKETTPVKDENIVEDSNSSEELFPYLDSPPEDKIQEI---SANDT 106

Query: 115 ELVQ 104
           E+ Q
Sbjct: 107 EIDQ 110


>Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical
           protein ZK1058.2 protein.
          Length = 809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = -1

Query: 448 NCPI---KFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVAC 335
           NCP    K    H E NCG C   P +    C  P  + +C
Sbjct: 569 NCPRHDRKICAEHGECNCGKCICAPGWTGRACECPISTDSC 609


>U28731-2|AAA68297.1|  658|Caenorhabditis elegans Hypothetical
           protein F12A10.4 protein.
          Length = 658

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -1

Query: 208 LLENSTEVKKCLENPHVREILELLDSSANPDE 113
           +L+   + K+C++  +  E+LEL+DSS NP E
Sbjct: 89  MLDLPCQTKECVK--YSAELLELMDSSVNPCE 118


>U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta
           pat-3 protein.
          Length = 809

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
 Frame = -1

Query: 448 NCPI---KFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVAC 335
           NCP    K    H E NCG C   P +    C  P  + +C
Sbjct: 569 NCPRHDRKICAEHGECNCGKCICAPGWTGRACECPISTDSC 609


>AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine
           receptor, class t protein65 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +1

Query: 445 NLCTYCHLIKRVYSYFHNIFLAY-FL--SVTYLFRLFG 549
           NL  YC + + V  +F  +FL + F+  ++ Y+ R+FG
Sbjct: 99  NLLNYCDVSQAVCHFFTGLFLIFPFITENIQYIVRIFG 136


>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 3/131 (2%)
 Frame = -1

Query: 406 CGTCRSDPKYK---CPTCMVPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTE 236
           C  C    +YK   CP C  P+ ++   + H+Q       +   +T+ + + + N  PT 
Sbjct: 290 CSNCADSLRYKHNNCPICRSPFRALIRLRAHRQT-----RNQIYETVSLVEGL-NGSPTP 343

Query: 235 DTVPLDRLNLLENSTEVKKCLENPHVREILELLDSSANPDELVQEYMQEPIFTEFVDACL 56
                D +N   NS+  +K   +            S+N   + Q    E +  E V  C+
Sbjct: 344 IPTVTDPVNPTVNSSTRRKRHSS----------SKSSNGKSMHQVLTMEQLGDEEVKECI 393

Query: 55  KVVQPQEEHET 23
           ++     EH+T
Sbjct: 394 EMSYIANEHDT 404


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = -1

Query: 442 PIKFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPP 287
           P++  P   +    TC   P  + P C     +  C  + +QNPC    + P
Sbjct: 234 PVQQNPCCQQQAQSTCDCAPVQQNPCCQQAQPACDCAPVVQQNPCACQQAQP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,065,999
Number of Sequences: 27780
Number of extensions: 304420
Number of successful extensions: 1206
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)