Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H02
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 287 KHNNKTLNAPEFLNTNSNKNTSNIETKFYDFICLND 394
           K+N++ L+  +   TN  K+  N   +   ++C N+
Sbjct: 304 KNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNE 339


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 287 KHNNKTLNAPEFLNTNSNKNTSNIETKFYDFICLND 394
           K+N++ L+  +   TN  K+  N   +   ++C N+
Sbjct: 196 KNNDQCLDLSKTKETNLEKSNLNHNEQLRKYLCKNE 231


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 235 KLNTYLFSVYRGVAIKYYVQTLKFRYNGFLTFRSNKY 125
           ++N YLFS    VAI +   T       F+    +KY
Sbjct: 117 RVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKY 153


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 404 WYKRRSIK*RQSCNKNGC 457
           +Y +   K RQ CN+N C
Sbjct: 476 YYAKDLEKQRQQCNQNKC 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,335
Number of Sequences: 336
Number of extensions: 3784
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)