Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_H02
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   0.97 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   1.3  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   2.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   2.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   5.2  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +2

Query: 290 HNNKTLNAPEFLNTNSNKNTSNIETKFY 373
           HNN   N   + N N N N  N   K Y
Sbjct: 91  HNNNNYNNNNYNNYNYNNNNYNNYKKLY 118


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKNTSNIETKFY 373
           EP+ I  L +N K  N   + N N+N N +N   K Y
Sbjct: 311 EPKIISSLSNNYKYSNYNNYNNYNNN-NYNNYNKKLY 346


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKNTSNIETKFY 373
           EP+ I  L +N    N  ++   N+N N +N   K Y
Sbjct: 77  EPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKNTSNIETKFY 373
           EP+ I  L +N    N  ++   N+N N +N   K Y
Sbjct: 77  EPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKN 346
           EP+ I  L +N K  N   + N N N N
Sbjct: 78  EPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKN 346
           EP+ I  L +N K  N   + N N N N
Sbjct: 78  EPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKN 346
           EP+ I  L +N K  N   + N N N N
Sbjct: 78  EPKIISSLSNNYKYSNYNNYNNNNYNNN 105


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 263 EPRTI*ILKHNNKTLNAPEFLNTNSNKN 346
           EP+ I  L +N K  N   + N N N N
Sbjct: 78  EPKIISSLSNNYKYSNYNNYNNNNYNNN 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,012
Number of Sequences: 438
Number of extensions: 4489
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)