Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G21
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 122 3e-28
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 121 4e-28
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.22
08_01_0269 - 2172363-2172538,2172632-2172697,2172790-2172887,217... 31 0.50
02_05_0105 + 25874155-25874495,25874586-25874615,25875327-258754... 31 0.66
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.87
11_01_0570 - 4529901-4529962,4530725-4530800,4531247-4531306,453... 29 2.0
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 29 3.5
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 28 4.6
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 28 4.6
05_04_0167 + 18668004-18668287,18668961-18669043,18669346-186694... 28 4.6
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 28 4.6
06_03_0493 + 21402536-21404599 28 6.1
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 27 8.1
01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688... 27 8.1
01_06_0995 + 33661367-33661380,33661729-33661826,33662059-336622... 27 8.1
01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535... 27 8.1
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 122 bits (293), Expect = 3e-28
Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Frame = -3
Query: 441 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKRQAVLCVLAEN 262
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 261 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDQGWQGKENCRLLLCCLSKIS 82
CD+ Y KLV+ALC EH + LV V + K LGEWAGLCKID +GK +++ C +
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDS--EGKAR-KVVGCSCVVVK 119
Query: 81 D--EETPALDVLQ 49
D EE+ L+++Q
Sbjct: 120 DYGEESEGLNIVQ 132
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 121 bits (292), Expect = 4e-28
Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Frame = -3
Query: 441 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKRQAVLCVLAEN 262
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLAE+
Sbjct: 4 ETPVEAPPAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 261 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDQGWQGKENCRLLLCCLSKIS 82
CD+ Y KLV+ALC EH + LV V + K LGEWAGLCKID +GK +++ C +
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDS--EGKAR-KVVGCSCVVVK 119
Query: 81 D--EETPALDVLQ 49
D EE+ L+++Q
Sbjct: 120 DFGEESEGLNIVQ 132
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -3
Query: 336 LVXGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 157
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 103
Query: 156 LCK 148
K
Sbjct: 104 TTK 106
>08_01_0269 -
2172363-2172538,2172632-2172697,2172790-2172887,
2173442-2173791
Length = 229
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 48 LAAHPTLEFPRPKSLIDNTGAADNFPCLAILGQSCRDQPILQA 176
LA P+ P +L T AA FP LA+ G QP++ A
Sbjct: 20 LAPKPSSSAAAPSALFPRTAAAAAFPTLAVRGSGKARQPVVAA 62
>02_05_0105 +
25874155-25874495,25874586-25874615,25875327-25875433,
25875884-25875918,25876310-25876438,25877103-25877294
Length = 277
Score = 31.1 bits (67), Expect = 0.66
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 363 APLAVLHSRPCCYPTRWGWWGPRLQHQP 446
+PLA +RPC +PT W P L+ P
Sbjct: 7 SPLAAAAARPCAFPTPWRCRSPPLRRLP 34
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -3
Query: 336 LVXGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 157
L G+ E K++ + LCV+A N V LC E IP + V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLAT-AG 103
Query: 156 LCK 148
K
Sbjct: 104 TTK 106
>11_01_0570 -
4529901-4529962,4530725-4530800,4531247-4531306,
4533797-4533959,4534037-4534091,4534314-4534366,
4534881-4534980,4535556-4535703,4535964-4536056
Length = 269
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 370 LQCYIHVHVVTRQDGVGGDLDF 435
++CY H H++T+ +G GGD +
Sbjct: 213 IECYEHNHLITKVEGDGGDSSY 234
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 327 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 169
GL+ +++ +A L V+A + D + ALC + ++P V +LG
Sbjct: 131 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 270 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 169
A CDE +K + +CN + L + D+N +G
Sbjct: 316 AFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIG 349
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 424 DLDFNISHGC*LFDCLAYRKKTIGRPNSFKFPIVSRIKYVLAVVL 558
DL F I +G ++ LA K IGRP +K P+V + VL +++
Sbjct: 420 DLRF-IDNGQDIYQRLA--KSEIGRPPHWKLPVVITVAVVLVIIV 461
>05_04_0167 +
18668004-18668287,18668961-18669043,18669346-18669434,
18670085-18670158,18670234-18670284,18671486-18671553,
18671666-18672234,18672333-18672383
Length = 422
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 201 VESDVRCTEPEQVSCMRLHHSSQPKHIVLLA 293
+ES ++ TEP + + LH +S+P +VL A
Sbjct: 268 IESSMQRTEPYKFPSLGLHSNSKPSSVVLSA 298
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -3
Query: 327 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 169
GL +++ +A L V+A + D + ALC + +IP V +LG
Sbjct: 116 GLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168
>06_03_0493 + 21402536-21404599
Length = 687
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -3
Query: 381 VALQEVLKTALIHGGLVXGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIP 202
V E+L T LIHG + E A L + D + Y L+Q LCN H++
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL---ELDISLYGALIQGLCNVHKLD 450
Query: 201 LVK 193
K
Sbjct: 451 EAK 453
>09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = -3
Query: 408 LSGNNMDVNV-ALQEVLKTALIHGGLVXGLHEAAKALDKRQA--VLCVLAENCDEAAYKK 238
L G M+ N+ AL V+ T + G + + +D +A + ++ +C+ Y +
Sbjct: 881 LIGLFMEFNLKALMGVIITTFLGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSR 940
Query: 237 LVQALCNEHQIPLVKVDNN 181
++ L +EH I K D N
Sbjct: 941 VISVLGDEHIIIFAKRDIN 959
>01_06_0996 +
33667663-33667900,33668019-33668091,33668785-33668841,
33668970-33669067,33669482-33669637,33669744-33670366,
33670484-33670560,33671551-33671805,33671950-33672067,
33672174-33672345,33672434-33672975
Length = 802
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 165 WAGLCKIDQGWQGKENC 115
W G+C++ +GW G NC
Sbjct: 228 WKGVCQVGEGW-GSNNC 243
>01_06_0995 +
33661367-33661380,33661729-33661826,33662059-33662214,
33663307-33663926,33664020-33664090,33664176-33664427,
33664494-33664611,33664715-33664886,33664970-33665511
Length = 680
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 165 WAGLCKIDQGWQGKENC 115
W G+C++ +GW G NC
Sbjct: 110 WKGVCQVGEGW-GSNNC 125
>01_06_0994 +
33653055-33653144,33653219-33653310,33653483-33653580,
33653758-33653913,33654009-33654628,33654721-33654794,
33654905-33655156,33655250-33655367,33655468-33655639,
33655729-33656270
Length = 737
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 165 WAGLCKIDQGWQGKENC 115
W G+C++ +GW G NC
Sbjct: 166 WKGVCQVGEGW-GSNNC 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,314,770
Number of Sequences: 37544
Number of extensions: 346405
Number of successful extensions: 1006
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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