Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G21
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal prote... 108 2e-24
AL023844-2|CAA19527.1| 163|Caenorhabditis elegans Hypothetical ... 34 0.063
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 1.4
U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical pr... 29 2.4
U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical ... 29 3.1
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 28 4.1
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 4.1
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 5.5
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 5.5
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 5.5
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 27 7.2
Z68493-1|CAA92789.1| 150|Caenorhabditis elegans Hypothetical pr... 27 9.5
U39741-3|AAA80430.1| 163|Caenorhabditis elegans Hypothetical pr... 27 9.5
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 27 9.5
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 27 9.5
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 27 9.5
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 27 9.5
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 27 9.5
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 27 9.5
>U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 12 protein.
Length = 140
Score = 108 bits (260), Expect = 2e-24
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Frame = -3
Query: 447 MADVEVEVPTNPI-LSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKRQAVLCVL 271
M+D +V P ++ MD AL+ VL+ A GL GLHE KALDKR+A CVL
Sbjct: 1 MSDAGGDVQVAPAAVAQGPMDKEGALRAVLRAAHHADGLAKGLHETCKALDKREAHFCVL 60
Query: 270 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDQGWQGKENCRLLLCCLS 91
AENCDE Y KLV+ LC EHQIPL+KV + K +GE+ GLCK D+ +GK R ++ C S
Sbjct: 61 AENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKYDK--EGK--ARKVVGCSS 116
Query: 90 KI 85
+
Sbjct: 117 AV 118
>AL023844-2|CAA19527.1| 163|Caenorhabditis elegans Hypothetical
protein Y48A6B.3 protein.
Length = 163
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -3
Query: 327 GLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 169
G+ + K L + + +C+LA N + +C E +IP V + + ++LG
Sbjct: 72 GIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLG 124
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 159 GLCKIDQGWQGKENCRLLLC 100
GLCK + GWQG C++ LC
Sbjct: 873 GLCKCEDGWQG-SRCQIPLC 891
>U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical
protein C30G12.6a protein.
Length = 1100
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 241 LVCGFITVLSQNT*YCLPLVKSFSGFVK 324
L+C I ++ Q + CLPLVK F+ + K
Sbjct: 818 LMCAIIMLVFQKSNECLPLVKIFASYCK 845
>U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical
protein C30G12.6b protein.
Length = 1097
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 241 LVCGFITVLSQNT*YCLPLVKSFSGFVK 324
L+C I ++ Q + CLPLVK F+ + K
Sbjct: 818 LMCAIIMLVFQKSNECLPLVKIFASYCK 845
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 219 NEHQIPLVKVDNNKKLGEWAGLCK 148
N++Q+ + V+NNKK+ +W G K
Sbjct: 345 NDNQVKIWDVENNKKVAQWDGHIK 368
>AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.9 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 342 GGLVXGLHEAAKALDKRQAVLCVLAENCDEAAYKKL 235
GGLV G+ A KAL V+ V++E C +A K L
Sbjct: 216 GGLVAGVATAVKALSPTTEVIGVVSETC-QAIVKSL 250
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Frame = +3
Query: 144 QSCRDQPILQAFCCCQP*PV----ESDVRC--TEPEQVSCMRLHHSSQPKHIVLLASC 299
QSC P +Q C CQ P E+ C T P Q SC Q ++V + C
Sbjct: 27 QSCGCAPKVQPSCSCQQTPYTQPQETSCSCQNTAPVQTSCSCAQPVQQQTYLVPTSQC 84
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 318 EAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGL 154
E KALD+ Q ++ VL + CD A K ++++ EH + N + L E AG+
Sbjct: 3504 EEDKALDQIQVLVDVLKQ-CDIQAVVKSLKSIVEEHCSGEKRRKNLEGLAELAGI 3557
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -3
Query: 345 HGGLVXGLHEAAKALDK----RQAVLCVLAENCDEAA---YKKLVQALCNEHQIPLVKVD 187
HG L+ + + D +QA CV + D+ + +K + C + + + D
Sbjct: 511 HGQLIDDICQCESGWDSVDCSQQACQCVNGDCLDDGSCQCWKGWRGSNCTDKKCAIGCED 570
Query: 186 NNKKLGEWAGLCKIDQGWQGKENCRLLLC 100
K + G CK GW G ENC + C
Sbjct: 571 RGKCASD--GSCKCSSGWNG-ENCAIDGC 596
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -3
Query: 345 HGGLVXGLHEAAKALDK----RQAVLCVLAENCDEAA---YKKLVQALCNEHQIPLVKVD 187
HG L+ + + D +QA CV + D+ + +K + C + + + D
Sbjct: 453 HGQLIDDICQCESGWDSVDCSQQACQCVNGDCLDDGSCQCWKGWRGSNCTDKKCAIGCED 512
Query: 186 NNKKLGEWAGLCKIDQGWQGKENCRLLLC 100
K + G CK GW G ENC + C
Sbjct: 513 RGKCASD--GSCKCSSGWNG-ENCAIDGC 538
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = -3
Query: 345 HGGLVXGLHEAAKALDK----RQAVLCVLAENCDEAA---YKKLVQALCNEHQIPLVKVD 187
HG L+ + + D +QA CV + D+ + +K + C + + + D
Sbjct: 635 HGQLIDDICQCESGWDSVDCSQQACQCVNGDCLDDGSCQCWKGWRGSNCTDKKCAIGCED 694
Query: 186 NNKKLGEWAGLCKIDQGWQGKENCRLLLC 100
K + G CK GW G ENC + C
Sbjct: 695 RGKCASD--GSCKCSSGWNG-ENCAIDGC 720
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 344 WI-KAVFSTSCSATFTSMLLPDKMGLVGTSTSTSAMVVDYLTVLRTGKRPSA 496
W+ + + SC F + PD + LV ++S++ +D LT L+ PSA
Sbjct: 209 WVQRKLLENSCKEFFETKKFPDFVRLVSCASSST---MDVLTALKENDIPSA 257
>Z68493-1|CAA92789.1| 150|Caenorhabditis elegans Hypothetical
protein C33A12.1 protein.
Length = 150
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = -3
Query: 285 VLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNN-KKLGEWAGLCKIDQ 139
+L L + +AAY+K +A+ + ++ LV+ +N+ KKL E G+ +I++
Sbjct: 65 ILRALEQIPRDAAYRKYTEAVVKQ-RLALVQAENDIKKLEEKIGMGQIEE 113
>U39741-3|AAA80430.1| 163|Caenorhabditis elegans Hypothetical
protein F12D9.2 protein.
Length = 163
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 390 DVNVALQEVLKTALIHGGLVXGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQ 229
D+N ++ LKT + G L A +AL KR L +L D A KK+ Q
Sbjct: 54 DLNTSIINWLKTGIEEGDLEGAAQRAIEALRKRNEELKLL--EMDPNAMKKVEQ 105
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 456 STTMADVEVEVP--TNPILSGNNMDVNVALQEVLKTALIHGGLVXGLHEAAKALDKR 292
ST+M+ E P +NP + NM + VA A++ L G+H+AAK L+K+
Sbjct: 172 STSMSGAECSAPFLSNPYV---NMGMYVAYYWTTLVAMLI--LYKGIHQAAKNLEKK 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,589,854
Number of Sequences: 27780
Number of extensions: 290741
Number of successful extensions: 768
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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