Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G19
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 36 0.024
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 30 0.90
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933... 30 0.90
02_01_0667 - 4958924-4959523 29 2.1
08_02_1012 + 23550314-23551504 29 2.7
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 2.7
11_06_0610 - 25449085-25453284 28 3.6
03_02_0223 + 6548810-6549025,6549159-6549211,6549457-6549492,654... 28 3.6
12_02_1086 - 25946501-25946632,25947140-25947385,25947510-25948193 28 4.8
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 4.8
01_05_0026 - 17315805-17315831,17315930-17316010,17316809-173168... 28 4.8
11_01_0361 + 2772193-2772334,2773457-2773587,2773872-2773985,277... 27 6.3
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304... 27 6.3
04_04_0096 - 22777684-22777797,22778668-22779047,22779162-227793... 27 6.3
02_01_0035 - 220036-221419,222050-222801 27 6.3
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757... 27 6.3
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 27 8.4
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 27 8.4
05_01_0063 + 446761-447681 27 8.4
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 8.4
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593... 27 8.4
02_01_0277 + 1848286-1848561 27 8.4
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 27 8.4
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 194 FLGNINWRCNFASSVSCVIVVVGM-LVRGSVWDFWRRLGSRRNQWLKTKGICMLPTKEEV 370
F + W+ ++C+ +++G+ L+RG + WR + + W C +
Sbjct: 392 FQSSTQWQSAIYKEMNCLELLIGLELLRGKIHSCWREMAQLKIPWTPPLNACAVTLLAHA 451
Query: 371 PESLQCR 391
ES C+
Sbjct: 452 RESFSCK 458
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 30.3 bits (65), Expect = 0.90
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 358 GRKHTNALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDAR 230
G+K +++ R++ L P PP + H HA N DAR
Sbjct: 879 GKKRSSSDRYDDLPLPPPPPPASRHEAAEHAHAKNTAAAADAR 921
>05_06_0051 -
25190803-25191216,25191301-25191891,25193248-25193317,
25193392-25193443,25195368-25195440,25195557-25195646
Length = 429
Score = 30.3 bits (65), Expect = 0.90
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 313 PRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 212
P+TQPPP P P+ H Y+Y + E P
Sbjct: 96 PQTQPPPPPPPPPTSAAHHAYHYQYQYQYEQPKP 129
>02_01_0667 - 4958924-4959523
Length = 199
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 334 RFEPLVSPRTQPPPEIPDG 278
R P++ PR PPP IPDG
Sbjct: 117 RPRPVLPPRPPPPPPIPDG 135
>08_02_1012 + 23550314-23551504
Length = 396
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Frame = -3
Query: 295 PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD------KGAPKQAANVRPT 134
P P PS + R R PP+ E+ SA S +G P +AA +PT
Sbjct: 150 PRPPPAPSPQKQQPQPQPRSPRPASPPPVPAAPEVASAVSTPPARPKRGRPPRAAKPQPT 209
Query: 133 P 131
P
Sbjct: 210 P 210
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDA 233
F LV P P P PD H+H H++++ DA
Sbjct: 32 FNILVPPPQSPRPRCPD---HQHHHHHHHHHDA 61
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 325 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAAN 146
P ++P PPPE PSH + +E PP T + S ++ P A
Sbjct: 883 PTLTPEISPPPEGKSPPSHTPES----SSPPSKESEPPPTPTPKSSPPSHEEYVPPSPAK 938
Query: 145 VRPTP 131
P P
Sbjct: 939 STPPP 943
>03_02_0223 +
6548810-6549025,6549159-6549211,6549457-6549492,
6549786-6549933,6550078-6550185,6550757-6550824,
6551846-6551969,6552067-6552213,6552545-6552805,
6552885-6553169,6553796-6553939,6554565-6554915,
6555405-6555470,6555598-6555768
Length = 725
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -3
Query: 406 LRDISPALQAFRNFLLGRKHTNALRFEPLVSPRTQPPPEIPDGPS 272
LRD + Q F N L R LR+ PLV+ PPP + +G S
Sbjct: 405 LRDATQ--QTFFNILKSRGE-KLLRYPPLVAVDLSPPPAVREGIS 446
>12_02_1086 - 25946501-25946632,25947140-25947385,25947510-25948193
Length = 353
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 267 LCEGPSGI-SGGGWVLGETNGSKRRAFV 347
LCEG S + GG+ + ETNG+K+ F+
Sbjct: 293 LCEGLSSVLKPGGFFVFETNGNKQSEFL 320
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 313 PRTQPPPEIPDGPSHKHAHNYY-YTRDARREV---APPIDVTKELLSASSDKG 167
P +Q PP PD S HA N Y++ + V I VT L ASS+KG
Sbjct: 366 PESQAPPNSPDSYSDLHALNKLPYSKIDSKAVGITTGVIFVTYSSLIASSEKG 418
>01_05_0026 -
17315805-17315831,17315930-17316010,17316809-17316871,
17317542-17317620,17317711-17317928,17319688-17319879
Length = 219
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 349 HTNALRFEPLVSPRTQPPPEI-PDGPSHKHA 260
H NAL++ P QPPP+ P P H HA
Sbjct: 26 HLNALQYNHQQQP--QPPPQATPPPPQHHHA 54
>11_01_0361 +
2772193-2772334,2773457-2773587,2773872-2773985,
2774303-2774459,2774577-2775000,2775238-2776030,
2776182-2776241,2776952-2777593
Length = 820
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 298 PPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTK 197
PP+I + + H +++R RE P+D+ K
Sbjct: 474 PPQIDEHKQPEENHQLHHSRQILRESGEPVDLAK 507
>10_08_0943 +
21728294-21728675,21728767-21728840,21729469-21730443,
21730617-21730683,21730765-21730827,21731001-21731064,
21731162-21731255,21731352-21731435,21731523-21731612,
21731708-21731735,21732117-21732596,21732679-21732740,
21732820-21732929,21733014-21733101,21733228-21733557,
21733782-21733904
Length = 1037
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 267 LCEGPSGISGGGWVLGETNGSKRRAFVC 350
LC G S I+G G + + NG RR C
Sbjct: 784 LCSGGSAIAGSGMLNSKGNGKHRREGPC 811
>04_04_0096 -
22777684-22777797,22778668-22779047,22779162-22779373,
22780119-22780561
Length = 382
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 364 LLGRKHTNALRFEPLVSPRTQPPPEIPDGPSH 269
+LG T RF + + RT PPP+ PD PS+
Sbjct: 138 ILGDTCTRGCRFCNVKTSRTPPPPD-PDEPSN 168
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 304 QPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAP 161
QPPP P H H H+ ++ E A P SA+S AP
Sbjct: 123 QPPPPARWAPQHHHHHHPHHHLGLDVEAAVPESSGAGAGSAASGAAAP 170
>01_06_0969 -
33472588-33474480,33475543-33475623,33475692-33475740,
33475866-33476281,33477208-33477447
Length = 892
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 403 RDISPALQAFRNFLLGRKHTNALRFEPLVSPRTQPPPEIPDGPSHK 266
R ++P LQ RN + + + F P P+ PPP P P+HK
Sbjct: 245 RIVTPFLQNARNVDIVKLPSV---FAPRPKPQPPPPPPPPTPPAHK 287
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 406 LRDISPALQAFRNFLLGRKHTNALRFEPLVSPRTQPPPEI 287
LR +S ALQ F + G H + L F+P +SP Q PE+
Sbjct: 45 LRRVSMALQWF---VAGDDH-HELIFDPFISPLKQQKPEL 80
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 304 QPPPEIPDGPS-HKHAHNYYYTRDARREVAPPIDVTKELLSAS 179
+PPP +P P + HA Y+YT + P E SAS
Sbjct: 502 RPPPPMPSYPDRYGHADRYHYTAPSATYDPPAYASYSEPYSAS 544
>05_01_0063 + 446761-447681
Length = 306
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2
Query: 284 WDFWRRLGSRR 316
W FWRR GSRR
Sbjct: 87 WQFWRRAGSRR 97
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -3
Query: 322 LVSPRTQPPPEIPDGPSHKHAHNYYYTR---DARREVAPPIDVTKELLSASSDKGAPKQA 152
LV+P PPPEI D P+H + +R D+ E+ PP ++++ + + +
Sbjct: 137 LVAP-PPPPPEIVDLPAHDVEELEWVSRIMDDSLSELPPPPQPPASVVASLAARPPQPRQ 195
Query: 151 ANVRPTPG 128
RP G
Sbjct: 196 LQRRPQDG 203
>03_02_0149 +
5933134-5933207,5935039-5935267,5935370-5935468,
5935582-5935616,5935694-5935769,5936552-5936662,
5937001-5937087,5937302-5937395,5937489-5937606,
5938047-5938542,5939263-5939298,5940047-5940578,
5940668-5940792
Length = 703
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 325 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 212
P P++ PPP P PS++ + N D + +APP
Sbjct: 592 PPPPPKSMPPPP-PKFPSNEMSRNEDRRSDLNKPMAPP 628
>02_01_0277 + 1848286-1848561
Length = 91
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 313 PRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPP 212
P PP P GPSH+ HN T +R+ PP
Sbjct: 50 PVRHKPPVPPSGPSHR--HNKRATVPRKRKHFPP 81
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = -3
Query: 343 NALRFEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTK 197
+ALR L P PPP D + + +Y++ ++ + P+ + K
Sbjct: 879 DALRLHELAFPSRAPPPGSADAKALPNPGDYHWRKNGEVHLNDPLAMAK 927
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,751,110
Number of Sequences: 37544
Number of extensions: 277008
Number of successful extensions: 948
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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