Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G19
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.12
AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine re... 32 0.20
AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine r... 32 0.20
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 32 0.27
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z83246-4|CAB05844.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73908-6|CAA98132.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.4
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 3.3
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 28 3.3
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 3.3
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 28 4.3
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 10.0
AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical... 27 10.0
AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical ... 27 10.0
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 10.0
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical
protein F45H10.3 protein.
Length = 168
Score = 42.3 bits (95), Expect = 2e-04
Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Frame = -3
Query: 349 HTNALRFEPLVSPR--TQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASS 176
+ N LRF S R + P +P G HK A NYY TRD RR V P +
Sbjct: 50 YQNPLRFPNTQSARPCSAELPALPGGVHHKLADNYYLTRDGRRNVDAPKVLYSSGEFVGG 109
Query: 175 DKGAPKQ-----AAN---VRPTPGHLXAWXK 107
+K P Q A N PTPG W +
Sbjct: 110 EKAQPAQVNQGVATNFGLTAPTPGFGAEWSR 140
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -3
Query: 325 PLVSPRTQP-PPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAA 149
P V P P PPE+ PS + A Y + R +V +D+T L + + P++
Sbjct: 374 PNVKPLVVPSPPELSQVPSFEEACEIYERWEDRDKVIEGVDLTTFLFNPQGSRKMPQKVR 433
Query: 148 NV 143
NV
Sbjct: 434 NV 435
>AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 61 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 405 YATFHLHCRLSGTSSLV-GSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLD 229
+A H C T+ +I P + ++W R+ +L+ S + S +T + E L
Sbjct: 179 FANSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLV 236
Query: 228 AKLHLQLMLPRNCLV 184
L+LQ++LP C V
Sbjct: 237 KGLNLQVLLPLICYV 251
>AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 75 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.20
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 405 YATFHLHCRLSGTSSLV-GSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLD 229
+A H C T+ +I P + ++W R+ +L+ S + S +T + E L
Sbjct: 179 FANSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLV 236
Query: 228 AKLHLQLMLPRNCLV 184
L+LQ++LP C V
Sbjct: 237 KGLNLQVLLPLICYV 251
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/65 (27%), Positives = 24/65 (36%)
Frame = -3
Query: 325 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAAN 146
P SP + P I K Y + R PP+ ++ SS PKQ
Sbjct: 420 PSPSPASNVPVTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQP 479
Query: 145 VRPTP 131
+PTP
Sbjct: 480 AQPTP 484
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 30.3 bits (65), Expect = 0.81
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 381 RLSGTSSLVGSIQMPFVLSHWFRLEPSLLQKSQTDPR-TSMPTTT 250
RL S+ VGS +P+ ++ L +LLQ+ +P TS P T
Sbjct: 219 RLHAASTFVGSPSIPYATNYNGELASALLQQKNVEPNITSQPQAT 263
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 30.3 bits (65), Expect = 0.81
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 381 RLSGTSSLVGSIQMPFVLSHWFRLEPSLLQKSQTDPR-TSMPTTT 250
RL S+ VGS +P+ ++ L +LLQ+ +P TS P T
Sbjct: 219 RLHAASTFVGSPSIPYATNYNGELASALLQQKNVEPNITSQPQAT 263
>Z83246-4|CAB05844.1| 414|Caenorhabditis elegans Hypothetical
protein F53B2.6 protein.
Length = 414
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -3
Query: 313 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 152
P T PP P P++ H N R ARR P T++LLS+SS+ K P
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316
Query: 151 ANVRPT 134
RPT
Sbjct: 317 PETRPT 322
>Z73908-6|CAA98132.1| 414|Caenorhabditis elegans Hypothetical
protein F53B2.6 protein.
Length = 414
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -3
Query: 313 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 152
P T PP P P++ H N R ARR P T++LLS+SS+ K P
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316
Query: 151 ANVRPT 134
RPT
Sbjct: 317 PETRPT 322
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 116 SXKVSRCX-SHISSLFRXPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDF 292
S S+C +H++S + + G + + S++ C I +V + + V+ F
Sbjct: 862 SSNSSQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTF 921
Query: 293 WRRLGSRRNQWLKTKGICML 352
+R L + RN + +C+L
Sbjct: 922 FRNLQNVRNSIHRNLCLCLL 941
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 325 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLS-ASSDKGAPKQAA 149
P ++ + PPP IP H Y + PP + +++ S +GAP+
Sbjct: 285 PALNNYSIPPPPIPGQWQQPHVAAQYVPQSVSSYSQPPPAAAQGVVTQPGSFRGAPRGRG 344
Query: 148 NVRPTPG 128
N+R G
Sbjct: 345 NIRGRGG 351
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 116 SXKVSRCX-SHISSLFRXPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDF 292
S S+C +H++S + + G + + S++ C I +V + + V+ F
Sbjct: 862 SSNSSQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTF 921
Query: 293 WRRLGSRRNQWLKTKGICML 352
+R L + RN + +C+L
Sbjct: 922 FRNLQNVRNSIHRNLCLCLL 941
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 268 KHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLXA 116
+ H+Y+Y R ++V PP + S D P+Q N+ P A
Sbjct: 279 RRTHSYWYKRP--KKVMPPSSSSSLKTSDDDDDSTPRQIKNLTVNPSERDA 327
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 382 QAFRNFLLGRKHTNALRFEPLVSPRTQPPPEIPD 281
++FR+F T + F+P SP T PP +PD
Sbjct: 124 RSFRDFYPSLSSTPS--FDPAQSPHTPHPPVLPD 155
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARR 227
F + +P TQP IP +K + + + R+ARR
Sbjct: 26 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARR 60
>AF000263-10|AAM22070.1| 163|Caenorhabditis elegans Hypothetical
protein T08B2.5d protein.
Length = 163
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARR 227
F + +P TQP IP +K + + + R+ARR
Sbjct: 84 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARR 118
>AF000263-9|AAO21391.2| 184|Caenorhabditis elegans Hypothetical
protein T08B2.5e protein.
Length = 184
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARR 227
F + +P TQP IP +K + + + R+ARR
Sbjct: 105 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARR 139
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARR 227
F + +P TQP IP +K + + + R+ARR
Sbjct: 84 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARR 118
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 331 FEPLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARR 227
F + +P TQP IP +K + + + R+ARR
Sbjct: 85 FPIMTTPATQPEISIPRSGENKSSRSPSWAREARR 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,589,649
Number of Sequences: 27780
Number of extensions: 218974
Number of successful extensions: 747
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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