Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G15
         (489 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97007-3|AAB52299.1|  374|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AL132860-26|CAB60511.2|  700|Caenorhabditis elegans Hypothetical...    27   9.7  

>U97007-3|AAB52299.1|  374|Caenorhabditis elegans Hypothetical
           protein ZC196.9 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 8/22 (36%), Positives = 18/22 (81%)
 Frame = +2

Query: 182 SQAYFIYYTIIALYVIITLGRT 247
           S+  ++YY++++L+V+ T+G T
Sbjct: 62  SEKNWLYYSVVSLFVVSTIGAT 83


>AL132860-26|CAB60511.2|  700|Caenorhabditis elegans Hypothetical
           protein Y56A3A.32 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 336 VILYNIQGPSLKISSRCTEDRQE 268
           V+L N+ GPSL ++ R  +DR++
Sbjct: 651 VLLLNVFGPSLDVARRIIDDRKK 673


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,905,762
Number of Sequences: 27780
Number of extensions: 177082
Number of successful extensions: 356
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)