Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G09
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432...   107   1e-23
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354...    29   5.7  
04_04_1258 + 32165918-32166041,32167218-32167384,32167569-321677...    28   7.6  
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894...    28   10.0 

>02_05_1360 +
           35942493-35942682,35942799-35942858,35943099-35943217,
           35945405-35945449,35945598-35945676,35945777-35945838,
           35945932-35946037,35946193-35946253,35947097-35947167,
           35947459-35947598,35947887-35947994
          Length = 346

 Score =  107 bits (257), Expect = 1e-23
 Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
 Frame = -3

Query: 782 KAAQVDPP-VRLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTR 606
           +A QV+   VRLV++R G V G+ GG +  M            G G+Q+  WIH DDL  
Sbjct: 193 RACQVNQEDVRLVLLRIGVVLGKDGGALAKMIPLFMMFAGGPLGTGRQWFSWIHQDDLVD 252

Query: 605 LINFAIENENVKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMI 426
           LI  +++N + KG++NG +PN +   E  +   + +GRP+++PVPE  L  A+  E A +
Sbjct: 253 LIYESLKNPSYKGVINGTAPNPVRLSEMCERLGRVVGRPSWLPVPEIALK-AVLGEGASV 311

Query: 425 MTXGQHVIPKRVLEYGFKYRYENINDACXEFA 330
           +  GQ V+P +  + GF YRY  + DA    A
Sbjct: 312 VLEGQKVLPVKAKQLGFSYRYPYVQDALRAIA 343


>07_03_1391 +
           26234647-26235026,26235112-26235226,26235345-26235410,
           26235519-26235607,26235717-26235807,26235917-26236063,
           26236160-26236252,26236373-26236474,26236581-26237255
          Length = 585

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 423 HNHSPFWMQCEVQDXFWYWYE 485
           H +   W+QCE ++ F+YW +
Sbjct: 199 HYYYDCWLQCESKEPFFYWLD 219


>04_04_1258 +
           32165918-32166041,32167218-32167384,32167569-32167769,
           32168472-32168631,32168729-32168942,32169160-32169307
          Length = 337

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 638 LPWIHIDDLTRLINFAIENENVKG--ILNGVSPNVITNEEF 522
           +P +H+DDL R   F  E E+  G  I + +S  V+    F
Sbjct: 235 IPTVHVDDLCRAEVFVAEKESASGRYICSSLSTTVVAFARF 275


>02_05_0402 +
           28687597-28687671,28688123-28688235,28688927-28689432,
           28689544-28689717,28689953-28690082,28692241-28692772,
           28693578-28693823,28694648-28695061
          Length = 729

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 376 NPYSSTLXGMTCCPXVIIIALSGCS 450
           +P+SST+    CC  V ++++S CS
Sbjct: 185 DPHSSTIQSPCCCANVPLVSVSCCS 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,228,252
Number of Sequences: 37544
Number of extensions: 332168
Number of successful extensions: 653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)