Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G09
         (805 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000989-1|AAH00989.1|  293|Homo sapiens chromosome 14 open read...   122   2e-27
AK123513-1|BAC85634.1|  198|Homo sapiens protein ( Homo sapiens ...   119   1e-26
AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.                119   1e-26

>BC000989-1|AAH00989.1|  293|Homo sapiens chromosome 14 open reading
           frame 124 protein.
          Length = 293

 Score =  122 bits (293), Expect = 2e-27
 Identities = 58/140 (41%), Positives = 84/140 (60%)
 Frame = -3

Query: 755 RLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTRLINFAIENEN 576
           R V++RSG V GR GG + +M            G G Q+ PWIHI DL  ++  A+E  +
Sbjct: 151 RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH 210

Query: 575 VKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTXGQHVIPK 396
           V G+LNGV+P+  TN EF ++F  ALGR AFIP+P A++      +RA+++  GQ VIP+
Sbjct: 211 VHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPR 270

Query: 395 RVLEYGFKYRYENINDACXE 336
           R L  G++Y +  +  A  E
Sbjct: 271 RTLATGYQYSFPELGAALKE 290


>AK123513-1|BAC85634.1|  198|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41519 fis, clone BRTHA2012392, highly  similar
           to Homo sapiens HCDI (HCDI) mRNA. ).
          Length = 198

 Score =  119 bits (286), Expect = 1e-26
 Identities = 57/140 (40%), Positives = 83/140 (59%)
 Frame = -3

Query: 755 RLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTRLINFAIENEN 576
           R V++RSG V GR GG + +M            G G Q+ PWIHI DL  ++  A+E  +
Sbjct: 56  RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGVPIGSGHQFFPWIHIGDLAGILTHALEANH 115

Query: 575 VKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTXGQHVIPK 396
           V G+LNGV+P+  TN EF ++   ALGR AFIP+P A++      +RA+++  GQ VIP+
Sbjct: 116 VHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQ 175

Query: 395 RVLEYGFKYRYENINDACXE 336
           R L  G++Y +  +  A  E
Sbjct: 176 RTLATGYQYSFPELGAALKE 195


>AF226050-1|AAF86950.1|  319|Homo sapiens HCDI protein.
          Length = 319

 Score =  119 bits (286), Expect = 1e-26
 Identities = 57/140 (40%), Positives = 83/140 (59%)
 Frame = -3

Query: 755 RLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTRLINFAIENEN 576
           R V++RSG V GR GG + +M            G G Q+ PWIHI DL  ++  A+E  +
Sbjct: 177 RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH 236

Query: 575 VKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTXGQHVIPK 396
           V G+LNGV+P+  TN EF ++   ALGR AFIP+P A++      +RA+++  GQ VIP+
Sbjct: 237 VHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPQ 296

Query: 395 RVLEYGFKYRYENINDACXE 336
           R L  G++Y +  +  A  E
Sbjct: 297 RTLATGYQYSFPELGAALKE 316


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,970,424
Number of Sequences: 237096
Number of extensions: 1974378
Number of successful extensions: 2594
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)