Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G09
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069155-1|AAL39300.1| 302|Drosophila melanogaster GH17516p pro... 114 1e-25
AE013599-1571|AAF58468.2| 302|Drosophila melanogaster CG8768-PA... 114 1e-25
AY094851-1|AAM11204.1| 410|Drosophila melanogaster RE11703p pro... 29 7.4
AE014296-3353|ABC66162.1| 410|Drosophila melanogaster CG33969-P... 29 7.4
AE014296-3352|AAF51589.2| 410|Drosophila melanogaster CG33969-P... 29 7.4
U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomer... 29 9.8
M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase ... 29 9.8
BT024967-1|ABE01197.1| 604|Drosophila melanogaster IP15225p pro... 29 9.8
BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p pro... 29 9.8
AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB... 29 9.8
AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC... 29 9.8
AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA... 29 9.8
AE014298-1623|AAF48046.1| 837|Drosophila melanogaster CG1745-PB... 29 9.8
>AY069155-1|AAL39300.1| 302|Drosophila melanogaster GH17516p
protein.
Length = 302
Score = 114 bits (275), Expect = 1e-25
Identities = 55/137 (40%), Positives = 82/137 (59%)
Frame = -3
Query: 755 RLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTRLINFAIENEN 576
+ I+R GAV G GGM+++M G+G Q +PWIH+ DL LI + IE
Sbjct: 159 KTTILRCGAVVGHGGGMVQSMWLPFKFGVGGPLGNGNQIMPWIHLHDLCSLIQYIIEKP- 217
Query: 575 VKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTXGQHVIPK 396
V G++N V+P + +N EF+K+FAKAL RP VPE ++ PERA ++ G V P+
Sbjct: 218 VPGVVNAVAPEITSNLEFSKAFAKALHRPCIFGVPEFVVQAIFGPERAALVLSGAKVKPQ 277
Query: 395 RVLEYGFKYRYENINDA 345
+ L GFK++Y ++ +A
Sbjct: 278 KALSSGFKFQYPSVKEA 294
>AE013599-1571|AAF58468.2| 302|Drosophila melanogaster CG8768-PA
protein.
Length = 302
Score = 114 bits (275), Expect = 1e-25
Identities = 55/137 (40%), Positives = 82/137 (59%)
Frame = -3
Query: 755 RLVIIRSGAVXGRWGGMIKNMXXXXXXXXXXXXGDGKQYLPWIHIDDLTRLINFAIENEN 576
+ I+R GAV G GGM+++M G+G Q +PWIH+ DL LI + IE
Sbjct: 159 KTTILRCGAVVGHGGGMVQSMWLPFKFGVGGPLGNGNQIMPWIHLHDLCSLIQYIIEKP- 217
Query: 575 VKGILNGVSPNVITNEEFTKSFAKALGRPAFIPVPEAILNFALHPERAMIMTXGQHVIPK 396
V G++N V+P + +N EF+K+FAKAL RP VPE ++ PERA ++ G V P+
Sbjct: 218 VPGVVNAVAPEITSNLEFSKAFAKALHRPCIFGVPEFVVQAIFGPERAALVLSGAKVKPQ 277
Query: 395 RVLEYGFKYRYENINDA 345
+ L GFK++Y ++ +A
Sbjct: 278 KALSSGFKFQYPSVKEA 294
>AY094851-1|AAM11204.1| 410|Drosophila melanogaster RE11703p
protein.
Length = 410
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 369 IFEPIFKYPLXYDMLPXGHNHSP 437
I E + YPL YD+L GH ++P
Sbjct: 41 IIEAYYFYPLAYDLLLCGHRNNP 63
>AE014296-3353|ABC66162.1| 410|Drosophila melanogaster CG33969-PB,
isoform B protein.
Length = 410
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 369 IFEPIFKYPLXYDMLPXGHNHSP 437
I E + YPL YD+L GH ++P
Sbjct: 41 IIEAYYFYPLAYDLLLCGHRNNP 63
>AE014296-3352|AAF51589.2| 410|Drosophila melanogaster CG33969-PA,
isoform A protein.
Length = 410
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 369 IFEPIFKYPLXYDMLPXGHNHSP 437
I E + YPL YD+L GH ++P
Sbjct: 41 IIEAYYFYPLAYDLLLCGHRNNP 63
>U80064-1|AAC24158.1| 972|Drosophila melanogaster DNA topoisomerase I
protein.
Length = 972
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 784 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 843
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 844 ANRAVAILCNHQRSVPK 860
>M74557-1|AAA28951.1| 972|Drosophila melanogaster topoisomerase I
protein.
Length = 972
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 784 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 843
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 844 ANRAVAILCNHQRSVPK 860
>BT024967-1|ABE01197.1| 604|Drosophila melanogaster IP15225p
protein.
Length = 604
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 46 NNRAT*SMVGERELTDRLELTQLDAKTDNSSI 141
+N+ T M+ E+E TD+++ T+ + KT+NS +
Sbjct: 495 SNKKTDKMLNEKETTDKMQ-TKKEKKTENSPV 525
>BT023755-1|AAZ41763.1| 974|Drosophila melanogaster RE58921p protein.
Length = 974
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 786 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 845
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 846 ANRAVAILCNHQRSVPK 862
>AE014298-2126|AAN09660.1| 581|Drosophila melanogaster CG6146-PB,
isoform B protein.
Length = 581
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 393 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 452
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 453 ANRAVAILCNHQRSVPK 469
>AE014298-2125|AAX52496.1| 974|Drosophila melanogaster CG6146-PC,
isoform C protein.
Length = 974
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 786 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 845
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 846 ANRAVAILCNHQRSVPK 862
>AE014298-2124|AAF48440.1| 974|Drosophila melanogaster CG6146-PA,
isoform A protein.
Length = 974
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -3
Query: 620 DDLTRLINFAIENENVKGILNGVSPNVITNEEFTKSFAKALG--RPAFIPVPEAILNFAL 447
DDL +N + NE++K ++ G++ V +K+ L VPE +L +
Sbjct: 786 DDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNR 845
Query: 446 HPERAMIMTXGQHVIPK 396
I+ Q +PK
Sbjct: 846 ANRAVAILCNHQRSVPK 862
>AE014298-1623|AAF48046.1| 837|Drosophila melanogaster CG1745-PB,
isoform B protein.
Length = 837
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +1
Query: 46 NNRAT*SMVGERELTDRLELTQLDAKTDNSSI 141
+N+ T M+ E+E TD+++ T+ + KT+NS +
Sbjct: 495 SNKKTDKMLNEKETTDKMQ-TKKEKKTENSPV 525
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,821,816
Number of Sequences: 53049
Number of extensions: 580093
Number of successful extensions: 1077
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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