Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G05
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512...    28   5.6  
08_01_0791 + 7652639-7652713,7652714-7652814,7652906-7652977,765...    28   7.5  

>10_08_0850 + 21050164-21050189,21050874-21050979,21051186-21051257,
            21051775-21051828,21052077-21052184,21052653-21052802,
            21052914-21053258,21053361-21054801,21054844-21055675,
            21057060-21057325,21057530-21059603,21060172-21060442,
            21060556-21060990
          Length = 2059

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 437  SIF*RALWTLNYLFTITTQYSEDLELYQKL 526
            SIF   LW   YL+  +T   ED++LYQ L
Sbjct: 1384 SIFAMVLWR-PYLYDTSTSNHEDIQLYQSL 1412


>08_01_0791 +
           7652639-7652713,7652714-7652814,7652906-7652977,
           7653171-7653261,7653444-7653524,7656759-7656842,
           7656931-7657053,7657542-7657670
          Length = 251

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 464 RSIELVKISNSLYGRNDKNRFCKCFFFL 381
           R   +V +++SLY    + RFCKCFF L
Sbjct: 119 RQHAMVVVADSLYYTKFR-RFCKCFFLL 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,723,912
Number of Sequences: 37544
Number of extensions: 230679
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)