Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G05
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104855-1|AAI04856.1|  328|Homo sapiens OR13A1 protein protein.       30   6.3  
BC104853-1|AAI04854.1|  328|Homo sapiens OR13A1 protein protein.       30   6.3  
AL512324-4|CAH73801.1|  308|Homo sapiens olfactory receptor, fam...    30   6.3  
AB065728-1|BAC05949.1|  308|Homo sapiens seven transmembrane hel...    30   6.3  
BC042083-1|AAH42083.1|  774|Homo sapiens transmembrane and tetra...    30   8.3  
AK127297-1|BAC86923.1|  574|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AK055962-1|BAB71057.1|  645|Homo sapiens UBUNIT (EC 2.4.1.-).  p...    30   8.3  

>BC104855-1|AAI04856.1|  328|Homo sapiens OR13A1 protein protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = -2

Query: 427 TGVMIRID----SVNVFFFCKI*PILMYTCN 347
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 178 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 208


>BC104853-1|AAI04854.1|  328|Homo sapiens OR13A1 protein protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = -2

Query: 427 TGVMIRID----SVNVFFFCKI*PILMYTCN 347
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 178 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 208


>AL512324-4|CAH73801.1|  308|Homo sapiens olfactory receptor, family
           13, subfamily A, member 1 protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = -2

Query: 427 TGVMIRID----SVNVFFFCKI*PILMYTCN 347
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 158 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 188


>AB065728-1|BAC05949.1|  308|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 12/31 (38%), Positives = 23/31 (74%), Gaps = 4/31 (12%)
 Frame = -2

Query: 427 TGVMIRID----SVNVFFFCKI*PILMYTCN 347
           TG+M+R+D    +V + FFC++ P+L+ +C+
Sbjct: 158 TGLMLRLDFCGPNVIIHFFCEVPPLLLLSCS 188


>BC042083-1|AAH42083.1|  774|Homo sapiens transmembrane and
           tetratricopeptide repeat containing 1 protein.
          Length = 774

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 356 IH*NRLNFTEKKNIYRIYSYHYARTSCSIF*RALWTLNYLFTITTQYSEDLELYQK 523
           +H N  NF + +   +   YHY RT+  ++ R    LN L T+T   +E    YQ+
Sbjct: 377 VHYNYANFLKDQGRNKEAIYHY-RTALKLYPRHASALNNLGTLTRDTAEAKMYYQR 431


>AK127297-1|BAC86923.1|  574|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45364 fis, clone BRHIP3016032. ).
          Length = 574

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 356 IH*NRLNFTEKKNIYRIYSYHYARTSCSIF*RALWTLNYLFTITTQYSEDLELYQK 523
           +H N  NF + +   +   YHY RT+  ++ R    LN L T+T   +E    YQ+
Sbjct: 439 VHYNYANFLKDQGRNKEAIYHY-RTALKLYPRHASALNNLGTLTRDTAEAKMYYQR 493


>AK055962-1|BAB71057.1|  645|Homo sapiens UBUNIT (EC 2.4.1.-).
           protein.
          Length = 645

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 356 IH*NRLNFTEKKNIYRIYSYHYARTSCSIF*RALWTLNYLFTITTQYSEDLELYQK 523
           +H N  NF + +   +   YHY RT+  ++ R    LN L T+T   +E    YQ+
Sbjct: 248 VHYNYANFLKDQGRNKEAIYHY-RTALKLYPRHASALNNLGTLTRDTAEAKMYYQR 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,885,049
Number of Sequences: 237096
Number of extensions: 1396066
Number of successful extensions: 1823
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)