Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_G04
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1185 + 24645963-24646316,24647990-24648226,24649027-246491...    30   2.7  
02_05_0678 - 30814192-30814310,30814636-30814660,30814948-308150...    30   2.7  
02_05_0914 + 32702753-32703078,32703940-32704000,32704132-327041...    29   6.1  
01_06_1490 - 37732724-37735020,37735803-37735980                       29   6.1  
12_02_0754 - 22817277-22817657,22817796-22817927,22818026-228182...    28   8.1  
08_02_0301 - 15503184-15504773,15504790-15504873                       28   8.1  

>07_03_1185 +
           24645963-24646316,24647990-24648226,24649027-24649170,
           24649296-24649427,24649524-24649811
          Length = 384

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = -2

Query: 563 PRSDS-RPRDTFNNTYYPNY--EGLLYTRNFEGNILLFTNWNRNKLYCWNMDTPYEEENV 393
           PRS S RPR   +   +P       L T++ E NI++  +      +CW     Y+    
Sbjct: 95  PRSSSTRPRSLADPELHPQQLLAKDLNTKDLETNIIVLVHGGGFGAWCW-----YKT--- 146

Query: 392 DLLSRLDEADYRFSALDASGSGCYALIQRTLNS 294
             ++ L+++ +R +A+D +GSG ++     ++S
Sbjct: 147 --IALLEDSGFRVNAIDLTGSGIHSYDTNKISS 177


>02_05_0678 -
           30814192-30814310,30814636-30814660,30814948-30815039,
           30815119-30815170
          Length = 95

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -2

Query: 140 RIAPKYVSDNVIRNVENIWKVQGHYELRHSES--SLET*PSNTKRR 9
           RI P Y+   +I ++  +W    HY   HS    S  T P+N  RR
Sbjct: 48  RIYPAYIYTGIIEHLSRLWSSTLHYR-EHSRQMRSYRTQPTNKDRR 92


>02_05_0914 +
           32702753-32703078,32703940-32704000,32704132-32704149,
           32704301-32704399
          Length = 167

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 446 RNKLYCWNMDTPYEEENVDLLSRLDEA 366
           R + Y W++  P E E +D + +LD+A
Sbjct: 68  RAEAYFWDVSKPVEMEEIDSMEKLDDA 94


>01_06_1490 - 37732724-37735020,37735803-37735980
          Length = 824

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +1

Query: 79  TFHIFSTFLMTLSDTYFGAILLENSNVWLADLRIT*SVHWLLLVHFDPSSSSSRLFEKNQ 258
           T  I+ST +  ++      ++L+  N+ LAD   T  +HW    HF  +        +N 
Sbjct: 112 TTAIWSTNISKIASNSTVGVILDTGNLVLADESNTSIIHWQSFDHFGNTWLPGGKLGRNN 171

Query: 259 KL 264
           KL
Sbjct: 172 KL 173


>12_02_0754 -
           22817277-22817657,22817796-22817927,22818026-22818272,
           22818473-22818909
          Length = 398

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 421 WILHMKKKMLIYSRDSMRLTIDFQ 350
           WI    +K+ +Y R S R+T DFQ
Sbjct: 339 WIEKQNQKLQLYGRASRRVTFDFQ 362


>08_02_0301 - 15503184-15504773,15504790-15504873
          Length = 557

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = -2

Query: 629 KRPKETYEHYVDFLNSTNQL----YEPRSD-SRPRDTFNNTYY--PNYEGLLYTRNFEGN 471
           K P+  Y +YVD    TN L      P S  SR R T+ + Y+   N+E L+  +     
Sbjct: 483 KNPRAAYVNYVDLDLGTNALAGNVSSPSSSVSRARSTWGSAYFSPANFERLVGAKTLIDR 542

Query: 470 ILLFTN 453
             +F+N
Sbjct: 543 SNVFSN 548


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,114,579
Number of Sequences: 37544
Number of extensions: 400663
Number of successful extensions: 1106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)