Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_G03
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 42 5e-04
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 42 5e-04
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 38 0.006
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 38 0.006
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 35 0.077
U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc metallopro... 32 0.41
AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix metall... 32 0.41
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 30 2.2
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 30 2.2
Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical pr... 29 2.9
U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMYPYYQL---PVDKLHVDDILGMQELY 666
VHEIGHSLG+ HS S+M P+Y+ V LH DDI ++ LY
Sbjct: 116 VHEIGHSLGLKHSSNHLSIMAPFYKQYTGAVMHLHQDDISAVKRLY 161
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/34 (44%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -3
Query: 791 HEIGHSLGMSHSXVKSSVMYPYYQ-LPVDKLHVD 693
HEIGH+LG+ HS ++M+PYY+ +P++++ +D
Sbjct: 244 HEIGHALGLDHSQKADALMHPYYKNVPINEIQLD 277
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/34 (44%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -3
Query: 791 HEIGHSLGMSHSXVKSSVMYPYYQ-LPVDKLHVD 693
HEIGH+LG+ HS ++M+PYY+ +P++++ +D
Sbjct: 276 HEIGHALGLDHSQKADALMHPYYKNVPINEIQLD 309
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/34 (44%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = -3
Query: 791 HEIGHSLGMSHSXVKSSVMYPYYQ-LPVDKLHVD 693
HEIGH+LG+ HS ++M+PYY+ +P++++ +D
Sbjct: 185 HEIGHALGLDHSQKADALMHPYYKNVPINEIQLD 218
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMYPYYQLPVD--------KLHVDDILGMQELY 666
+HE GH+LG+ HS ++++M P+YQ D L DDI +Q +Y
Sbjct: 253 IHEGGHTLGLEHSRDENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 303
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMYPYYQLPVD--------KLHVDDILGMQELY 666
+HE GH+LG+ HS ++++M P+YQ D L DDI +Q +Y
Sbjct: 253 IHEGGHTLGLEHSRDENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 303
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 34.7 bits (76), Expect = 0.077
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMYPYYQ---LP---VDKLHVDDILGMQELY 666
+HEIGH LG+ H+ + S+M+P ++ LP VD + D L ++++Y
Sbjct: 219 LHEIGHILGLPHTFYRGSIMHPIFKPVLLPHGTVDTVPNVDRLAIRKIY 267
>U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc
metalloprotease protein 1 protein.
Length = 521
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 791 HEIGHSLGMSHSXVKSSVMYPY 726
HE+GH+LG SHS SVM+ Y
Sbjct: 215 HEMGHALGFSHSPDIDSVMFAY 236
>AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 521
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 791 HEIGHSLGMSHSXVKSSVMYPY 726
HE+GH+LG SHS SVM+ Y
Sbjct: 215 HEMGHALGFSHSPDIDSVMFAY 236
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 515 ARYGLHHLAHN-KEESHEGK*NEDHSKKSSTSKKPALSH 628
A +G HH H+ KE H + HSKK T K SH
Sbjct: 697 AHHGAHHGHHDDKENHHHHGHHSKHSKKQHTKKSHKKSH 735
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 545 NKEESHEGK*NEDHSKKSST 604
NK+ES EG N++HS +SST
Sbjct: 13 NKKESREGSSNDEHSNESST 32
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMY----PYYQLPVDKLHVDDILGMQELY 666
VHEIGH LG+ HS + M+ PY P L DD+ ++ L+
Sbjct: 161 VHEIGHLLGLEHSMDVRAAMFAAKRPYD--PAFTLGDDDVRAIRSLF 205
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -3
Query: 794 VHEIGHSLGMSHSXVKSSVMY----PYYQLPVDKLHVDDILGMQELY 666
VHEIGH LG+ HS + M+ PY P L DD+ ++ L+
Sbjct: 161 VHEIGHLLGLEHSMDVRAAMFAAKRPYD--PAFTLGDDDVRAIRSLF 205
>Z68299-2|CAA92611.2| 344|Caenorhabditis elegans Hypothetical
protein T04B2.4 protein.
Length = 344
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 190 FVYHSIKSHISNEQAPPPLRPTAHIPKARPTKKEEEIQSFTL 315
+ Y I H N++ PP RPT HI K + + E + FT+
Sbjct: 222 YCYLFIVLHERNKKTPP--RPTRHISKRKELARMREAKLFTM 261
>U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical
protein C14E2.4 protein.
Length = 429
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 184 NDFVYHSIKSHISNEQAPPPLRPTAHIPKA 273
+D +H++K+H++ + P P PT H A
Sbjct: 332 SDIDFHTLKNHLNFQMVPFPSLPTEHTTHA 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,341
Number of Sequences: 27780
Number of extensions: 293243
Number of successful extensions: 882
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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