Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F22
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    66   1e-12
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 66.1 bits (154), Expect = 1e-12
 Identities = 31/77 (40%), Positives = 43/77 (55%)
 Frame = -2

Query: 474 IFVQGSQEAKEDDHDVFASQFFHTYSLPVNSSAADVTAELTSDGYLVVTAPISENVDKTK 295
           + V+G  E K+DDH   +  F   Y LP   + AD+ + L+SDG L +T P  E   + K
Sbjct: 38  VLVEGKHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVSSLSSDGILTITCPRKE--IEQK 95

Query: 294 NTERVVPIVETGAPYKK 244
           N ER +PI  TG P K+
Sbjct: 96  NEERSIPITHTGQPMKQ 112


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 226 DDSRNLGRFYDSGAEDISSSGSDCSTGTRGEERTDHALRT 107
           DDS +      S ++  SSS SD S+ +  EE  +  + T
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKIST 402


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 357 LTSDGYLVVTAPISENVDKTKNTERVVPIVETGAPYKKDE 238
           L + GYL++  P+SE     + T+ +  +   G    ++E
Sbjct: 533 LLTHGYLIMQVPVSEGCGPFRGTQYMYQLFMQGILKLREE 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,910
Number of Sequences: 2352
Number of extensions: 10030
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)