Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F21
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LL03 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q8I421 Cluster: Putative uncharacterized protein PFE040...    33   6.0  
UniRef50_A0CSV1 Cluster: Chromosome undetermined scaffold_26, wh...    33   7.9  

>UniRef50_A6LL03 Cluster: Putative uncharacterized protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Putative
           uncharacterized protein - Thermosipho melanesiensis
           BI429
          Length = 215

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 33  FLMFFK--GSIMVQCCSYFIHYLISCCFKYINYSILKLGVLLYDKCLNLQVMSC 188
           FL+FF    ++ +    Y ++ LIS  F +  YS L   + L+D  LN+ + +C
Sbjct: 43  FLLFFVLFSTVFLNVDMYILYILISIAFIFNVYSFLTYKISLFDFILNVTIYTC 96


>UniRef50_Q8I421 Cluster: Putative uncharacterized protein PFE0405c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0405c - Plasmodium falciparum (isolate 3D7)
          Length = 414

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 27  HKFLMFFKGSIMVQCCSYFIHYLISCCFKYI-NYSILKLGVLLYDKCL 167
           +K+L F++   ++   SYFI +LIS C  Y+  Y + K+   L +K +
Sbjct: 59  NKWLSFYRTKYLIPQVSYFIFFLISGCITYVLKYILNKISNSLGEKLI 106


>UniRef50_A0CSV1 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1024

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -3

Query: 464 VLYIXFYIFVHSISRSRLYSCLFTLMNKYLEHNNI*F----RIYNYI 336
           ++ +    F H   R+++YS    LMN ++  NNI F    RI NY+
Sbjct: 362 IIIVALGFFFHKSQRNKIYSESMNLMNSFMSMNNIDFNLQVRIRNYL 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,013,477
Number of Sequences: 1657284
Number of extensions: 6988317
Number of successful extensions: 13262
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13254
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)