Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F21
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.025
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.7  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.025
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 24  FHKFLMFFKGSIMVQCCSYF--IHYLISCCFKYINYSILKLGVLLYDKCLNLQVMSCHFT 197
           ++ F++F    +++ C  YF  +H L  C F      +L L  + Y  C  + ++  ++ 
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYF 301

Query: 198 C 200
           C
Sbjct: 302 C 302


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 285 HL-LTIVYIVMRPLFNLSKKYFNQQSKFCHM 196
           HL L  + ++   L   +K +FN    FCHM
Sbjct: 371 HLQLVAIRLLNTKLQFTAKDFFNLDWTFCHM 401


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 285 HL-LTIVYIVMRPLFNLSKKYFNQQSKFCHM 196
           HL L  + ++   L   +K +FN    FCHM
Sbjct: 327 HLQLVAIRLLNTKLQFTAKDFFNLDWTFCHM 357


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 437 VHSISRSRLYSCLFTLMNKY 378
           ++SISR  L + L T + KY
Sbjct: 105 IYSISRDYLNNVLLTELEKY 124


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 437 VHSISRSRLYSCLFTLMNKY 378
           ++SISR  L + L T + KY
Sbjct: 105 IYSISRDYLNNVLLTELEKY 124


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 437 VHSISRSRLYSCLFTLMNKY 378
           ++SISR  L + L T + KY
Sbjct: 105 IYSISRDYLNNVLLTELEKY 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,196
Number of Sequences: 336
Number of extensions: 2159
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)