Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_F20
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 49 3e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 49 3e-06
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 43 2e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 38 0.005
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 37 0.014
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 37 0.014
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 37 0.014
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 0.54
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 0.54
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 0.94
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 29 2.2
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.0
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 28 5.0
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 5.0
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 5.0
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 28 5.0
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 6.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 6.6
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 6.6
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 6.6
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 6.6
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 28 6.6
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 28 6.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 6.6
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 6.6
U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 55.2 bits (127), Expect = 4e-08
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 2/183 (1%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPPKPNSQCPRRNGFFAH 470
C +G+A + CP LVF+P I+ CD P NV DC +++E KP + C +G+F+
Sbjct: 197 CSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE----KPQN-CGEVDGYFSF 248
Query: 469 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECP 290
S + F C G + C GL F E + C + + C+ + + ++
Sbjct: 249 GRCS--SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDE--CDLESSGFMENYKA- 303
Query: 289 KEQLVDAQGQIVAHPKFPHPNDC-QRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENV 113
E L + DC R C NG E C V+NE S CD PE
Sbjct: 304 SEALTPCTNM----DNGLYALDCTPRVLSCQNGRE-NIFECPPSLVFNENSLICDYPETS 358
Query: 112 RGC 104
C
Sbjct: 359 LKC 361
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Frame = -1
Query: 502 QCPRRNGFFAHPDPSV----C-NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQ 338
+C + +G + D ++ C N+F++C EG A C A L F+ +C WP +
Sbjct: 170 ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNV--M 227
Query: 337 GCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGE 158
C+E+ +K ++ C G++ + F F C NG+ P + C G
Sbjct: 228 DCSEKSEKPQN---C---------GEVDGY--FSFGRCSSSFSACTNGI-PIVMFCPDGL 272
Query: 157 VYNEESQKCDAPENVRGCE 101
+++E++Q CD NV C+
Sbjct: 273 MFSEKNQMCDYEWNVDECD 291
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 229 NDCQR-FYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCED 98
++C F+ C G+ R C V+N CD P+NV C +
Sbjct: 188 SECSNVFFSCSEGIAHRR-NCPANLVFNPAISSCDWPKNVMDCSE 231
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 217 RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPG 65
RF C++G E R + C VY++ + CD NV C + +++E + G
Sbjct: 41 RFLACVSG-EARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDG 90
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Frame = -1
Query: 445 FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA---GRQGCNEQQKKTKDGFECPKEQLV 275
F C+ GEA + C L + + C W + G +G + G E++
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDGSGESSGDEEIT 101
Query: 274 --DAQGQIVAHPKFPH-----------PNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQK 134
D+ G+ + C Y+ N PR L C +Y+ ++K
Sbjct: 102 FGDSSGESSGDELLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKK 161
Query: 133 C 131
C
Sbjct: 162 C 162
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 48.8 bits (111), Expect = 3e-06
Identities = 55/199 (27%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPPKPNSQCPRRNGFFAH 470
C G+A CP LVF+PTI CD P +V +C P P C +G+F+
Sbjct: 267 CSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL-----PTPQPTC-EEDGYFSF 317
Query: 469 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGR----QGCNEQQKKTKDG 302
S + F C G A + C AGL F E + C + + G + +
Sbjct: 318 GQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEASGEQS 375
Query: 301 FECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GVEPRDLGCQVGE--------- 158
E E +A G+ N C L+ G PR L CQ G
Sbjct: 376 GEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSS 435
Query: 157 -VYNEESQKCDAPENVRGC 104
V+N++S CD P+ C
Sbjct: 436 LVFNDQSLICDYPQTSLKC 454
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 226 DCQ-RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 71
+C+ +F C G+ R + C +YNE CD NV GCE + S E +
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCEGSGESSGETS 87
Score = 31.9 bits (69), Expect = 0.41
Identities = 34/139 (24%), Positives = 47/139 (33%)
Frame = -1
Query: 472 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFEC 293
HP+ F C G A + C A L F+ C WP +D EC
Sbjct: 255 HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP---------------RDVAEC 299
Query: 292 PKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENV 113
L Q F F C NG + C G ++E + +CD NV
Sbjct: 300 AG--LPTPQPTCEEDGYFSFGQCSSSFTACTNG-RAIVMFCPAGLKFSESTVRCDYESNV 356
Query: 112 RGCEDWYKDSEEAAPGPKS 56
C++ + A G +S
Sbjct: 357 SECQETSGEESGEASGEQS 375
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 48.8 bits (111), Expect = 3e-06
Identities = 55/199 (27%), Positives = 76/199 (38%), Gaps = 18/199 (9%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPPKPNSQCPRRNGFFAH 470
C G+A CP LVF+PTI CD P +V +C P P C +G+F+
Sbjct: 267 CSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL-----PTPQPTC-EEDGYFSF 317
Query: 469 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGR----QGCNEQQKKTKDG 302
S + F C G A + C AGL F E + C + + G + +
Sbjct: 318 GQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGEASGEQS 375
Query: 301 FECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GVEPRDLGCQVGE--------- 158
E E +A G+ N C L+ G PR L CQ G
Sbjct: 376 GEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSS 435
Query: 157 -VYNEESQKCDAPENVRGC 104
V+N++S CD P+ C
Sbjct: 436 LVFNDQSLICDYPQTSLKC 454
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 226 DCQ-RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 71
+C+ +F C G+ R + C +YNE CD NV GCE + S E +
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCEGSGESSGETS 87
Score = 31.9 bits (69), Expect = 0.41
Identities = 34/139 (24%), Positives = 47/139 (33%)
Frame = -1
Query: 472 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFEC 293
HP+ F C G A + C A L F+ C WP +D EC
Sbjct: 255 HPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWP---------------RDVAEC 299
Query: 292 PKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENV 113
L Q F F C NG + C G ++E + +CD NV
Sbjct: 300 AG--LPTPQPTCEEDGYFSFGQCSSSFTACTNG-RAIVMFCPAGLKFSESTVRCDYESNV 356
Query: 112 RGCEDWYKDSEEAAPGPKS 56
C++ + A G +S
Sbjct: 357 SECQETSGEESGEASGEQS 375
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = -1
Query: 616 CPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYN 437
C L F+ + KCD P V G Q N +C F A D + C +FY
Sbjct: 1213 CQSSLAFN---QLTGKCDYPQKVS-GCENHGQT---NGECSEHGSFIA--DANNCEVFYR 1263
Query: 436 CIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGF 299
C+ G + C +G F+ C WP + C+ Q + +
Sbjct: 1264 CVWGRKVVMTCPSGTVFNPLLSVCDWPSAV--PSCSGQASDSNSSY 1307
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = -1
Query: 454 CNIFYNCIEGEATE-VKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPKEQL 278
C+ C GE E C + L F++ +G C +P GC E +T EC +
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVS--GC-ENHGQTNG--ECSEH-- 1248
Query: 277 VDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCED 98
G +A N+C+ FY C+ G + + C G V+N CD P V C
Sbjct: 1249 ----GSFIADA-----NNCEVFYRCVWGRKVV-MTCPSGTVFNPLLSVCDWPSAVPSCSG 1298
Query: 97 WYKDSEEA 74
DS +
Sbjct: 1299 QASDSNSS 1306
Score = 41.9 bits (94), Expect = 4e-04
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 14/198 (7%)
Frame = -1
Query: 649 ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT------ELQPPKPNSQCPRR 488
EC D KLC G +FD N+C + CG ++ P P++
Sbjct: 1049 ECTDAGNVEKLCRIGKLFDS---HSNRCVP--RIGCGKEAIRDAIKDMIATTPAPAQPKQ 1103
Query: 487 -NGFFAHPDPS------VCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGC 332
G AH D VC+ Y C G + +C+ F C+ +S C
Sbjct: 1104 FEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVS--AC 1161
Query: 331 NEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVY 152
+ + + +Q G+ + + DC C G CQ +
Sbjct: 1162 TVPKNPSIKKYYTSNDQSAFCDGK--EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAF 1219
Query: 151 NEESQKCDAPENVRGCED 98
N+ + KCD P+ V GCE+
Sbjct: 1220 NQLTGKCDYPQKVSGCEN 1237
Score = 32.7 bits (71), Expect = 0.23
Identities = 46/192 (23%), Positives = 67/192 (34%), Gaps = 19/192 (9%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQP-PKPNSQCP-RRNGFFA 473
CV+GV C D VF + D+ + TE P C +++G ++
Sbjct: 51 CVNGVRQAATCSDDSVFYED--ECVPVDESPECRVDENTEEDDTPYAEFDCTSKQDGIYS 108
Query: 472 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFEC 293
N F +C+ G A KC L F+E + C +Q + +DG E
Sbjct: 109 I---GCSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQVYEDGEEG 165
Query: 292 PKEQLVDAQGQIVAHPKFPHPN----DCQR-------------FYVCLNGVEPRDLGCQV 164
E + G P P+ DC FY C N + + C
Sbjct: 166 YGEASGEIAGDYERQPSNEQPDSIDFDCNGLEDGNYADGCNDVFYSCSNNMVFQRY-CPP 224
Query: 163 GEVYNEESQKCD 128
G V+N Q CD
Sbjct: 225 GTVFNINQQSCD 236
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 235 HPNDCQRFY-VCLNGVEPRDLGCQVGEVYNEESQKCDAPENV--RGCED 98
H C FY VC +G CQ+GE Y+ Q C + R C++
Sbjct: 894 HGTGCSSFYFVCSHGRLISSGNCQLGEGYDPSVQGCRTFSEIPARACDE 942
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 42.7 bits (96), Expect = 2e-04
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 17/215 (7%)
Frame = -1
Query: 649 ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTEL--QPPKPNSQC-PRRNGF 479
+CV+ V + CP+GL FD + + + GDR L + + C R +G
Sbjct: 60 QCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTLNVRQKAVSINCVGRLSGD 119
Query: 478 FAHPDPSVCN-IFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKT--- 311
+A D +VCN +Y C G + KC + C + + G + Q
Sbjct: 120 YA-LDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYHTNCNASGGVKDQAAAAYA 178
Query: 310 -----KDGFECPKEQLVDAQG----QIVAHPKFPHPNDCQ-RFYVCLNGVEPRDLGCQVG 161
D + ++ + ++ F C F+ C NG R C
Sbjct: 179 SPTYDSDNYIVTTKEFENGHNGLDCKVTGDMHFTDNVKCSPYFWQCSNGKLFRKT-CPEK 237
Query: 160 EVYNEESQKCDAPENVRGCEDWYKDSEEAAPGPKS 56
+Y + CD PE+V+ C + Y SE + PK+
Sbjct: 238 LIYVLDQNLCDFPESVKDCPE-YNGSETSYRAPKT 271
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 226 DCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAP 68
DC+++ + + C G Y+ KCD ENV GC + YK + +A P
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPE-YKPTTDATP 751
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 226 DCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAP 68
DC+ +Y+ N E C G Y++ + +CD E+V C + YK + P
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPE-YKPTPSTTP 850
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 451 NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPK 287
++FY C G+ C A L F+ Y G C + S + C Q T + PK
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQGYQPTTTPSYSYPK 641
Score = 34.3 bits (75), Expect = 0.076
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 2/188 (1%)
Frame = -1
Query: 649 ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD-CGDRTELQPPKPNSQCPRRNGFFA 473
+C+ G + C GL ++ K C VD C N+ + +G+++
Sbjct: 908 QCMQGRSLISSCAPGLFYN---EKNGMCAYKHTVDTCKIGKGSDIIDSNACFGKSDGYYS 964
Query: 472 HPDPSVCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFE 296
+ C+ +Y +CI+ + ++ C L F + S CV+P A + C+ +
Sbjct: 965 ----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDA--KECSIATTLDRTPPA 1018
Query: 295 CPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPEN 116
P + + + H K P+ + VC NG C VYN ++Q C+
Sbjct: 1019 VPSD-FCTIRSNGLHHLKMCSPH----YIVCDNG-RAFSGTCIAPLVYNGDTQTCNYKST 1072
Query: 115 VRGCEDWY 92
+ C + Y
Sbjct: 1073 NKDCGNDY 1080
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 214 FYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPGPKSRS 50
FY+C NG + C ++N +CD NVR C+ + + + PK+ S
Sbjct: 591 FYICANG-QVVATTCPANLIFNPYVGECDYSTNVRDCQGYQPTTTPSYSYPKTTS 644
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = -1
Query: 493 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKK 314
R +G +A P S + C++G + C GL ++E +G C + K
Sbjct: 892 RPDGIYALPYCS--QDYVQCMQGRSLISSCAPGLFYNEKNGMCAY-------------KH 936
Query: 313 TKDGFECPK-EQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQ 137
T D + K ++D+ + + C +Y + R + C +++ES+
Sbjct: 937 TVDTCKIGKGSDIIDSNACFGKSDGY-YSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESE 995
Query: 136 KCDAPENVRGC 104
KC P + + C
Sbjct: 996 KCVFPIDAKEC 1006
Score = 28.3 bits (60), Expect = 5.0
Identities = 33/152 (21%), Positives = 53/152 (34%)
Frame = -1
Query: 526 LQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 347
L P P CP +G +A + + C+ E C GL+FD C +
Sbjct: 36 LNPKGP--PCPDGDGLYA---VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARC--ERRS 88
Query: 346 GRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQ 167
C + T + + K ++ G++ + +Y C NG+ C
Sbjct: 89 SNHLCATGDRVTLNVRQ--KAVSINCVGRLSGDYALDKTVCNENYYQCANGISYM-RKCP 145
Query: 166 VGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 71
+VY ++CD N KD AA
Sbjct: 146 YQQVYVPILKRCDYHTNC-NASGGVKDQAAAA 176
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DC 542
C +G CP L+F+P + +CD NV DC
Sbjct: 594 CANGQVVATTCPANLIFNP---YVGECDYSTNVRDC 626
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Frame = -1
Query: 493 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKK 314
+ +GF+ P+ + C +F C+ ++ + C +GL +YS + + ++ GC+ +
Sbjct: 484 KSDGFY--PNSNNCGLFVLCLSSKSYSMSCPSGL---QYSASLKYCTTSTASGCSVTTTR 538
Query: 313 TKDGF-ECPKEQLVDAQGQIVAHPKFPH--------PNDCQRFYVCLNGVEPRDLGCQVG 161
+ + P F P+DC +F C+NG+ + C G
Sbjct: 539 APTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGIS-YNFECPNG 597
Query: 160 EVYNEESQKCDAPE 119
++ ++ CD P+
Sbjct: 598 LSFHADTMMCDRPD 611
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 511 PNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPD 353
P +C + +GFF P S C F C+ G + +C GL F + C PD
Sbjct: 562 PAFKCTK-DGFFGVP--SDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -2
Query: 531 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 352
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 351 PPEDKDVTNNKKKQRTASSAPKSS 280
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -2
Query: 531 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 352
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 351 PPEDKDVTNNKKKQRTASSAPKSS 280
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -2
Query: 531 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 352
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 351 PPEDKDVTNNKKKQRTASSAPKSS 280
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -2
Query: 531 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 352
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 351 PPEDKDVTNNKKKQRTASSAPKSS 280
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = -1
Query: 646 CVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFF 476
C DG+ + K CP F R KC + + C + T +C + G++
Sbjct: 695 CPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT--------GKCRCKPGYY 745
Query: 475 AHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG--CNEQQKKTKD 305
H +C+ + G A + C AG+ D +G C AG QG C++
Sbjct: 746 GHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNLCDQPCPAGYF 803
Query: 304 GFECPKE 284
G++C ++
Sbjct: 804 GYDCEQK 810
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = -1
Query: 646 CVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFF 476
C DG+ + K CP F R KC + + C + T +C + G++
Sbjct: 695 CPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT--------GKCRCKPGYY 745
Query: 475 AHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG--CNEQQKKTKD 305
H +C+ + G A + C AG+ D +G C AG QG C++
Sbjct: 746 GHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNLCDQPCPAGYF 803
Query: 304 GFECPKE 284
G++C ++
Sbjct: 804 GYDCEQK 810
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -1
Query: 298 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEVYNEESQKCD 128
E +EQL ++VA H ++C++ + G + R + C+V GE+ N ++ C+
Sbjct: 461 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 520
Query: 127 APENVR 110
+ +VR
Sbjct: 521 SLASVR 526
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -1
Query: 298 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEVYNEESQKCD 128
E +EQL ++VA H ++C++ + G + R + C+V GE+ N ++ C+
Sbjct: 795 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 854
Query: 127 APENVR 110
+ +VR
Sbjct: 855 SLASVR 860
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 469 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 365
PD C FY C G T+ C G +D++ TC
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTC 201
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPPKPNSQCPRRNGFFAH 470
C G++ CP L++DP +I C+ +NV CG + + NG F
Sbjct: 81 CSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVTSTQEAIFICENGLFFS 137
Query: 469 PDPSVC 452
P+ + C
Sbjct: 138 PEQARC 143
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 568 CDQPFNVDC--GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF 443
C+ PF+V G T P PN P GF+++ D + +F
Sbjct: 161 CEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLKLF 204
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 550 VDCGDRTELQPPKPNSQCPRRNGF 479
+D G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 550 VDCGDRTELQPPKPNSQCPRRNGF 479
+D G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/97 (21%), Positives = 37/97 (38%)
Frame = -2
Query: 339 KDVTNNKKKQRTASSAPKSSWLMPKDRXXXXXXXXXXXTANVSTYA*TVSSPVTSAAKSE 160
+ + + + RTAS PK+ P N S + + S +++ K
Sbjct: 59 RSASKSATRGRTASKTPKTPSKTPSSASARSRSRSRGRPTNASRLSASTPSASSTSVKRS 118
Query: 159 RFITKRARNAMRLRTFADARTGTRTLRKPHQDPNRDL 49
R +TK R+ ++ AD T + Q R+L
Sbjct: 119 RSVTKTPRDVVKTIEVADDEDEVTTPSRLRQRNVRNL 155
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 535 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEV 410
+ ++ PKPN G+F H SV + F+ GE +V
Sbjct: 311 KRDMTSPKPNDDDGTLMGYFRHGYQSVADFFHRKTVGEEEQV 352
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 390 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 274
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 375 PVPASGPIPPEDKDVTNNKKKQ 310
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 375 PVPASGPIPPEDKDVTNNKKKQ 310
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 390 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 274
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 65 SWCGFLRVLVPVLASANVLRRIAFLALFVINLS 163
S CGF+ ++ ++ N LRRI +L +I ++
Sbjct: 388 SGCGFIYTIIVMIMRGNTLRRIIVRSLDIITIT 420
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG----DRTELQPPKPNSQ 500
C G++ CP L++DP +I C+ +NV CG D T Q P+ +
Sbjct: 81 CSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVTSTQEAYPSEE 131
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 568 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 392
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 391 HFDE 380
H D+
Sbjct: 2118 HDDD 2121
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 568 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 392
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 391 HFDE 380
H D+
Sbjct: 2702 HDDD 2705
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 568 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 392
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 391 HFDE 380
H D+
Sbjct: 2118 HDDD 2121
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 568 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 392
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 391 HFDE 380
H D+
Sbjct: 2702 HDDD 2705
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 387 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 262
+T T P S P P + K++ S P+ L+PKD
Sbjct: 120 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 161
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 387 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 262
+T T P S P P + K++ S P+ L+PKD
Sbjct: 215 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 256
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 387 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 262
+T T P S P P + K++ S P+ L+PKD
Sbjct: 198 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 239
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -1
Query: 643 VDGVATTKLCPDGLVFDPTIRKINKCDQP---FNVDCGDRTELQPPKPNSQCPRR 488
+ G+ T + PD +PT K + C P F+ T QPP+P PRR
Sbjct: 622 LSGIDTKRKVPD----EPTTSKRDACCSPVREFDDQQHQFTSSQPPQPAESSPRR 672
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -1
Query: 646 CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG----DRTELQPPKPNSQ 500
C G++ CP L++DP +I C+ +NV CG D T Q P+ +
Sbjct: 81 CSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVTSTQEAYPSEE 131
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 568 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 392
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 391 HFDE 380
H D+
Sbjct: 2702 HDDD 2705
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 148 EESQKCDA-PENVRGCEDWYKDSEEAAPGPKSR 53
E+ K D PE + G ED Y+D EE P P +R
Sbjct: 214 EKRPKIDVKPEEIEG-EDEYEDVEEPIPPPNTR 245
>U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical
protein R05G6.9 protein.
Length = 378
Score = 27.5 bits (58), Expect = 8.7
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = -1
Query: 469 PDPSVCNIFYNC--IEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFE 296
P S N+ N ++ +A E+ CTA +G CV A CN K GF+
Sbjct: 106 PTASSLNLLNNPFGLDDDALEM-CTAS--DCNGNGVCVGSKKAPLCLCN----LGKTGFK 158
Query: 295 CPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVG 161
C E A F P+DC +CL CQ+G
Sbjct: 159 CESEISGLLNMDPSAPITFCSPSDCNNKGLCLGTKNSFSCACQIG 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,782,004
Number of Sequences: 27780
Number of extensions: 367300
Number of successful extensions: 1622
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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