Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F19
         (746 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0E8X6 Cluster: Chromosome undetermined scaffold_83, wh...    33   5.6  
UniRef50_A3J240 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_A0E8X6 Cluster: Chromosome undetermined scaffold_83, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_83,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 439

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -1

Query: 197 VSIPVAGYHKFSLVLKYI*VI-ANIKK--ALKYLYTLNYLLIKGNKKE 63
           V IP+ G HK   VLKY   +  NI+    LK++Y +N L IK  K+E
Sbjct: 379 VQIPITGKHKKGRVLKYGNELPINIQYFFLLKFVYCINVLQIKNTKQE 426


>UniRef50_A3J240 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BAL38|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BAL38
          Length = 461

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 619 ILSLTTLVIKYIKFPYSEYLNHLKTPQFISYPVPMLA 509
           I S T LV++++KFPY EY N  +  + IS  + +LA
Sbjct: 211 IASATFLVVRFLKFPYEEYANSQRRKR-ISQVISILA 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,402,122
Number of Sequences: 1657284
Number of extensions: 10672850
Number of successful extensions: 17204
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17201
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)