Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F19
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.64 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.64 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.5  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 480 LVLKVGHFFKFLP 442
           LVLKVGHFF   P
Sbjct: 8   LVLKVGHFFAITP 20


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 480 LVLKVGHFFKFLP 442
           LVLKVGHFF   P
Sbjct: 8   LVLKVGHFFAITP 20


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 423 TSSTLHTIN*ICILHYKVCLL 361
           T+  L+T+N IC LH+ +  L
Sbjct: 495 TNKQLNTLNKICALHHHLSKL 515


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 429 LLTSSTLHTIN*ICILH 379
           L+  STL+T N +CI H
Sbjct: 911 LIFVSTLYTANVVCICH 927


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 423 TSSTLHTIN*ICILHYKVCLL 361
           T+  L+T+N IC LH+ +  L
Sbjct: 220 TNKQLNTLNKICALHHHLSKL 240


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 296 FHTIAITICFCY 331
           F+TI  + C+CY
Sbjct: 265 FNTIVFSFCYCY 276



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 296 FHTIAITICFCY 331
           F+TI    C+CY
Sbjct: 546 FNTIVFAFCYCY 557


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,407
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)