Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F16
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    28   0.087
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.35 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.5  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +2

Query: 167 NFHITVMFVCYTYIILCTYLISIIYCYFILFNNFH**YTRGNY-VFTFKLLQYPAYVP*H 343
           N  +   ++CYT  ++ T  I  + C + +FN ++   +  N+ VF F ++         
Sbjct: 34  NNEVPRWYICYTIGVIIT--IGCL-CIWSIFNKWNQFRSYSNFSVFLFDIITIVTLTSTS 90

Query: 344 FKLIISYCVVQEKMSQTTLL 403
             LI++   V+EK  +T L+
Sbjct: 91  ILLIVNAVFVKEKRIRTLLI 110


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 20/85 (23%), Positives = 38/85 (44%)
 Frame = +2

Query: 170 FHITVMFVCYTYIILCTYLISIIYCYFILFNNFH**YTRGNYVFTFKLLQYPAYVP*HFK 349
           F + + F+   Y   C ++I  ++  F+L   +H  +     +FT  LL   A++  +  
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTVHLLFLLC-IYH--FFCAFIIFTMHLLFCCAFIFFNMH 192

Query: 350 LIISYCVVQEKMSQTTLLLVCNTYF 424
           L+   C+  +  +   L L C  YF
Sbjct: 193 LLFLLCL--DYFTLHLLFLPCIYYF 215



 Score = 25.4 bits (53), Expect = 0.46
 Identities = 23/85 (27%), Positives = 34/85 (40%)
 Frame = +2

Query: 170 FHITVMFVCYTYIILCTYLISIIYCYFILFNNFH**YTRGNYVFTFKLLQYPAYVP*HFK 349
           F I ++F C   I+LC Y     Y  FILF           Y +   LL   A++     
Sbjct: 222 FTIHLLFYCVLIILLCIY---YFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278

Query: 350 LIISYCVVQEKMSQTTLLLVCNTYF 424
           L+   C+         ++L+C  YF
Sbjct: 279 LLFLLCIYY--FYCALIILLCIYYF 301



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
 Frame = +2

Query: 227 ISIIYCYFILFNNFH**YTRGNYVFTFKLLQYPAYV--P*HFKLIISYCVVQEKMSQTTL 400
           I   YC  I FN  H  +   +  FT  LL Y  ++    HF L   Y           +
Sbjct: 56  IYYFYCVSITFN-VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYY------FYYAFI 108

Query: 401 LLVCNTYFKHIKPVS*VHEHFTTKFFFFLINL 496
           +L+C  YF +   +  VH  F    ++F++ L
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPL 140


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 270 IDNTQEGTTYSRLNYCNT 323
           I NT+ G +Y+ L+Y N+
Sbjct: 76  IINTETGLSYTNLDYGNS 93


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 627 NWMKLQCLFKSQ 662
           NW K+ CL + Q
Sbjct: 83  NWFKIHCLLQEQ 94


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 270 IDNTQEGTTYSRLNYCNT 323
           I NT+ G +Y+ L+Y N+
Sbjct: 76  IINTETGLSYTNLDYGNS 93


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 270 IDNTQEGTTYSRLNYCNT 323
           I NT+ G +Y+ L+Y N+
Sbjct: 76  IINTETGLSYTNLDYGNS 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,103
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)