Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F14
         (728 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3...    34   0.60 
AC004528-2|AAC12680.1|  901|Homo sapiens R32184_2 protein.             31   4.2  
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.               31   5.6  
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si...    31   5.6  
BC008073-1|AAH08073.2|  373|Homo sapiens FAM38A protein protein.       31   5.6  
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.                  31   5.6  
BC039878-1|AAH39878.1|  825|Homo sapiens chromosome 14 open read...    30   9.8  

>AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3B
           protein.
          Length = 1043

 Score = 33.9 bits (74), Expect = 0.60
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +3

Query: 126 LGVENATLTHMG*FHTYTLQLISRVGSGARVNVFAASSGRVSKTVNTRPP 275
           LG+ +A L+ +G  H +  Q + R+  G+R+  +  +S ++ + +NT PP
Sbjct: 840 LGLGSALLSSLG-EHAFFRQALPRIRKGSRLQYWLHTSQKIHRALNTEPP 888


>AC004528-2|AAC12680.1|  901|Homo sapiens R32184_2 protein.
          Length = 901

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +3

Query: 126 LGVENATLTHMG*FHTYTLQLISRVGSGARVNVFAASSGRVSKTVNTRPP 275
           LG+ +A L+ +G  H +    + R+  G+R+  +  +S ++ + +NT PP
Sbjct: 840 LGLGSALLSSLG-EHAFFRLALPRIRKGSRLQYWLHTSQKIHRALNTEPP 888


>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
          Length = 2035

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 707  VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAAD 543
            +A  S   +  A+  EG++D + +IPN+  K   APN   +A  V +++  E AD
Sbjct: 1842 LAPNSTARRQLASLLEGTSDQSVVIPNLFPKYIRAPN-GPEANPVKQLQPNEEAD 1895


>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
            similarity 38, member A protein.
          Length = 2035

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 707  VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAAD 543
            +A  S   +  A+  EG++D + +IPN+  K   APN   +A  V +++  E AD
Sbjct: 1842 LAPNSTARRQLASLLEGTSDQSVVIPNLFPKYIRAPN-GPEANPVKQLQPNEEAD 1895


>BC008073-1|AAH08073.2|  373|Homo sapiens FAM38A protein protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 707 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAAD 543
           +A  S   +  A+  EG++D + +IPN+  K   APN   +A  V +++  E AD
Sbjct: 196 LAPNSTARRQLASLLEGTSDQSVVIPNLFPKYIRAPN-GPEANPVKQLQPNEEAD 249


>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
          Length = 2090

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 707  VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAAD 543
            +A  S   +  A+  EG++D + +IPN+  K   APN   +A  V +++  E AD
Sbjct: 1897 LAPNSTARRQLASLLEGTSDQSVVIPNLFPKYIRAPN-GPEANPVKQLQPNEEAD 1950


>BC039878-1|AAH39878.1|  825|Homo sapiens chromosome 14 open reading
           frame 155 protein.
          Length = 825

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = -1

Query: 722 EVQATVAE-ISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVP-EIKTPEA 549
           EVQ+  A+ +S EE P         ++ A        I L    E+ A   P E++ P A
Sbjct: 558 EVQSPSAKGVSIEEAPLELQPPSGEETTA--EEASAAIQLLAATEASAEEAPAEVQPPPA 615

Query: 548 ADAPKLADNPVDEDKPADI 492
            +AP     P  E+ PA++
Sbjct: 616 EEAPAEVQPPPAEEAPAEV 634


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,332,615
Number of Sequences: 237096
Number of extensions: 1162452
Number of successful extensions: 2737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2734
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)