Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_F14
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 1.9
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 5.9
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 7.9
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 28 7.9
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 620 KKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 492
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 686 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADN-PVDE 510
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 509 DKP 501
P
Sbjct: 340 TTP 342
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 6 IITYVIRNSIIYFDKXLHRRXFLISLFK*VSRSRK*TVIHLGVENATLTHMG*FHTYTLQ 185
++ Y++R S + +H+ F + LF S R TV+ +G++N+ H+ Q
Sbjct: 6198 VLVYLLRKS-----EDIHKNYFDVELFL-KSSPRCSTVVFVGMDNSPSVHLSLGLIRCYQ 6251
Query: 186 LISRV 200
L+SR+
Sbjct: 6252 LVSRI 6256
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 713 ATVAEISKEEKPSA--TDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADA 540
AT S E +A TD+ SAD+ A + + A + E+ A + +T A
Sbjct: 318 ATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSV 377
Query: 539 P-KLADNPVDEDKPADI 492
P +AD D P+ I
Sbjct: 378 PAPVADAAAGYDSPSSI 394
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -2
Query: 352 PQKVRNHLTNPNLKKTNLR*TAEALSGGRVLTVFDTRPLLAANTLTRAPL---PTREIN- 185
P V N+L N T+ GRV+T D+ P+ A T+ P+ P N
Sbjct: 342 PFNVDNNLNINNQIMAISNETSMVARHGRVITYEDSAPV--AKIPTQQPIHNYPNSTQND 399
Query: 184 CSVYV*NYPM*VRVAFSTPRWITVYFLD 101
C +Y N +RV RW+ V+ D
Sbjct: 400 CDMYKLNATETIRVNNDIERWVQVHSFD 427
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -1
Query: 707 VAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLA 528
V E +K + + T A+ A+ + ++ AP+VES A + P D +
Sbjct: 469 VHEETKIDSAAETHADAPVVDASPAEDQASEVTEAPHVES-AKSAPATSEDHKEDVAQAT 527
Query: 527 DNPVDEDKPAD 495
V+ PAD
Sbjct: 528 SEQVETQAPAD 538
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 695 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAADAPKLADNPV 516
SK K +A+D + + A + K P E D +KTP+ K A+ P
Sbjct: 218 SKSTKRAASDDDEEEEPVATKKSKKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPE 276
Query: 515 DEDK 504
+ED+
Sbjct: 277 EEDE 280
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 692 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPNVESDAAAVPEIKTPEAADAPKLADNPV 516
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 515 DEDKP 501
P
Sbjct: 247 TSQSP 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,382,549
Number of Sequences: 27780
Number of extensions: 182454
Number of successful extensions: 551
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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