Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_F13
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 91 9e-19
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 91 1e-18
Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 31 1.0
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 31 1.0
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 29 3.1
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 29 5.5
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 29 5.5
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 29 5.5
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 29 5.5
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 29 5.5
Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50794-2|CAA90657.2| 681|Caenorhabditis elegans Hypothetical pr... 28 9.6
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 28 9.6
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 28 9.6
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 28 9.6
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 28 9.6
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 91.1 bits (216), Expect = 9e-19
Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 11/288 (3%)
Frame = -1
Query: 847 EFSGTITDVGKK-SVFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGG 671
E SG +++VG + + G ++ ++P C LC+ C+ G+Y C +T + G
Sbjct: 67 ETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPV--HGT 124
Query: 670 WAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNL 491
+++V D + LPD +S E G L EP S H R + + +G ++L++GAG IG L
Sbjct: 125 LSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGN-VQMGHRVLVLGAGPIGVL 183
Query: 490 WVTSLHQLGHRDVTVSEMNKVRLEIVNKLETGYRL----VTPDVLEKE------KQLYDV 341
+ + +G V +++++ RL + KL + + D ++ E Q DV
Sbjct: 184 NLITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKSEIITALGDQQPDV 243
Query: 340 IIDCTGVGKVMEISFNYLRHGGKYVLFGCCPPTHQASINPFQIYDKELTIIGVKINPFSF 161
I+CTG +E + + GG VL G + I + +E+ + G+ +
Sbjct: 244 CIECTGAQPSIETAITTTKSGGVIVLVGL--GADRVEIPIIESATREVDMRGIFRYVNCY 301
Query: 160 PNALGWLKAMGNRYVNYEKLGVKTYALSEYESALKDLRAGLVXKAMFK 17
P A ++ + + +N L Y L E + A K + V K +
Sbjct: 302 PTA---IELISSGKLNLSGLTRAHYKLEETQEAFKRTQKADVIKVFIQ 346
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Frame = -1
Query: 847 EFSGTITDVGKK-SVFRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGG 671
E SG ++++G + F+ G ++ ++P C LC+ C+ G+Y C +T + +G
Sbjct: 67 ESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPV--NGA 124
Query: 670 WAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGAGIIGNL 491
+++V D + LPD +S E G L EP S VA R + +G+KIL++GAG IG L
Sbjct: 125 LSRFVVHDADFCFKLPDNLSFEDGALLEPLS-VAIQACRRGTVQMGQKILVLGAGPIGVL 183
Query: 490 WVTSLHQLGHRDVTVSEMNKVRLEIVNKLETGYRL---------VTPDVLEK-EKQLYDV 341
+ + +G V ++++N RL + L + V ++++ Q V
Sbjct: 184 NLLTAKAIGASKVVITDLNDERLALARLLGADATINVMGKRSDEVRSEIIKAFGDQQPHV 243
Query: 340 IIDCTGVGKVMEISFNYLRHGGKYVLFG 257
I+CTGV +E + R GG VL G
Sbjct: 244 SIECTGVQPCVETAIMTTRSGGVVVLVG 271
>Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical
protein C30H6.6 protein.
Length = 677
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -1
Query: 724 YCLT-AGINSTVGIWRDGGWAQYVKVPQDQVYLLPDGVSTEQGGLCEPYSCVAHGYDRAS 548
YCL AG+N VG R ++ ++ QD + D + G V GY +S
Sbjct: 157 YCLQIAGVN-IVGSLRKMVYSSIIR--QDMTFF--DKNMVGEIGSRHAADTVIVGYSVSS 211
Query: 547 PLLVGEKILIVGAGIIGNLWVTSL 476
L G + ++VG G IG + +TSL
Sbjct: 212 SLRAGVRAVLVGVGSIGMMLMTSL 235
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 796 GQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 626
GQ++ D P C+ C + K +Y ++ NS +G+W+D + +KV ++ L
Sbjct: 44 GQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNS-MGVWQDSNYTMCIKVVEEYAQCL 100
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 796 GQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDGGWAQYVKVPQDQVYLL 626
GQ++ D P C+ C + K +Y ++ NS +G+W+D + +KV ++ L
Sbjct: 44 GQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNS-MGVWQDSNYTMCIKVVEEYAQCL 100
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 30.7 bits (66), Expect = 1.4
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 10/207 (4%)
Frame = -1
Query: 847 EFSGTITDVGKKSV-FRNGQKVVVD-PNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 674
E +G++ +GK ++ G K V N C C+FC+KG C G R G
Sbjct: 70 EGAGSVVQIGKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHI---QNYGFDRSG 126
Query: 673 GWAQYVKV-PQDQVYLLPD-GVSTEQGGLCEPYSCVAHGYDRASPLLVGEKILIVGA-GI 503
+ +Y+ + D + D ++ LC + + S + G+ I++ GA G
Sbjct: 127 TFQEYLTIRGVDAAKINKDTNLAAAAPILCA--GVTVYKALKESNVAPGQIIVLTGAGGG 184
Query: 502 IGNLWVTSLHQLGHRDVTVSEMNK-VRLEIVNKLETGYRLVTPDVLEKEKQLYD----VI 338
+G+L + +G R V + +K + + TPD++ +L + +
Sbjct: 185 LGSLAIQYACAMGMRVVAMDHGSKEAHCKGLGAEWFVDAFETPDIVSHITKLTEGGPHGV 244
Query: 337 IDCTGVGKVMEISFNYLRHGGKYVLFG 257
I+ K ME + Y+R G V G
Sbjct: 245 INFAVARKPMEQAVEYVRKRGTVVFVG 271
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 541 LVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIVNK 407
+V KIL++GAG IG + +L G R V V +++ + + +N+
Sbjct: 11 IVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNR 55
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 822 LGRSLXSGTVRRSSWIRTEPAAXVISVVKENTSTA*P 712
+G S+ GT+ R SWI E +A ++ ++ + T P
Sbjct: 206 IGMSVGLGTMNRCSWIEKECSAELVKMILDPFETVYP 242
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 513 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 620
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 513 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 620
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 513 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 620
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 513 PTMRIFSPTSRGEARS*PCATQEYGSHRPPCSVDTP 620
P ++ +S S +R PC T + +H P DTP
Sbjct: 21 PKVKDYSRLSSSPSRDQPCETSYFENHFPSLECDTP 56
>Z81122-6|CAB03358.1| 663|Caenorhabditis elegans Hypothetical
protein T13F2.7 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 665 GPASVPPDPDGTVNTGGQAVLVFSFT-TEITXAAGSVRIHDD 787
G + D DG V GG+A+ S+ T A+G VR +DD
Sbjct: 405 GDVDMDSDDDGNVTIGGEALSFDSWARITKTKASGVVRANDD 446
>Z50794-2|CAA90657.2| 681|Caenorhabditis elegans Hypothetical
protein F59F5.3 protein.
Length = 681
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 526 ILIVGAGIIGNLWV---TSLHQLGHRDVTVSEMNKVRLEIVN 410
+LI+GAG+I ++V SL Q + V+ +++ + R+E +N
Sbjct: 324 LLIIGAGLILTIFVILTKSLRQNNYNKVSTTDVRETRIEELN 365
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 541 LVGEKILIVGAGIIGNLWVTSLHQLGHRDVTVSEMNKVRLEIVNK 407
L KIL++GAG +G + +L G R + V +M+ + + +N+
Sbjct: 40 LQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNR 84
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -1
Query: 847 EFSGTITDVGKKSV-FRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 674
E SG + VG+ F G VV C C++C+ K C I+ G DG
Sbjct: 71 EGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 129
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 712 AGINSTVGIWRDGGWAQYVKVPQD 641
AG ++ + IWR+ Q++KVP+D
Sbjct: 272 AGDDNVITIWRENLQGQWIKVPRD 295
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -1
Query: 847 EFSGTITDVGKKSV-FRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 674
E SG + VG+ F G VV C C++C+ K C I+ G DG
Sbjct: 71 EGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 129
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = -1
Query: 847 EFSGTITDVGKKSV-FRNGQKVVVDPNRACSLCDFCRKGKYQYCLTAGINSTVGIWRDG 674
E SG + VG+ F G VV C C++C+ K C I+ G DG
Sbjct: 73 EGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDG 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,245,655
Number of Sequences: 27780
Number of extensions: 425036
Number of successful extensions: 1253
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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