Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F11
         (784 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24CW0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q4Z957 Cluster: ORF170; n=1; Staphylococcus phage Twort...    34   3.5  
UniRef50_Q600Z4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q5DE92 Cluster: SJCHGC05177 protein; n=1; Schistosoma j...    33   6.1  
UniRef50_A0DVE1 Cluster: Chromosome undetermined scaffold_65, wh...    33   8.1  

>UniRef50_Q24CW0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 505

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -2

Query: 528 LMVCIVVYYVGIIEKYNLSVLIVYVNIF*SVTTLYSMFKYLYMKDSLVG 382
           L+   ++YY   + KYNL  +I+++  F +V  L SM  Y+Y+K +  G
Sbjct: 447 LLFSNILYYY--VNKYNLQSIIIWIIFFITVLNLISMPYYIYVKSTQYG 493


>UniRef50_Q4Z957 Cluster: ORF170; n=1; Staphylococcus phage
           Twort|Rep: ORF170 - Staphylococcus phage Twort
          Length = 90

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 23/69 (33%), Positives = 35/69 (50%)
 Frame = -2

Query: 555 FIAFNFYFRLMVCIVVYYVGIIEKYNLSVLIVYVNIF*SVTTLYSMFKYLYMKDSLVGTR 376
           F  FN+   L +  ++Y   I+  Y L+VL++Y N+   ++ LYS F Y Y+   L G R
Sbjct: 9   FTYFNYCIMLNILHLIYS-NILVIY-LNVLVIYTNLV--LSMLYSTFIYYYLYILLYGFR 64

Query: 375 AMKLFELFY 349
               F   Y
Sbjct: 65  FYTFFVYMY 73


>UniRef50_Q600Z4 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma hyopneumoniae 232|Rep: Putative
           uncharacterized protein - Mycoplasma hyopneumoniae
           (strain 232)
          Length = 394

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = -2

Query: 552 IAFNFYFRLMVCIVVYYVGIIEKYNLSVLIVYVNIF*SVTTLYSMFKYLYMKDSLV 385
           IAF+FYF  +V   +     + K    +++  ++IF  + ++Y++ KY   K  LV
Sbjct: 339 IAFSFYFFYIVPRYIAIFACLTKKGFYIILYILDIFVPIVSIYNLIKYKQNKTILV 394


>UniRef50_Q5DE92 Cluster: SJCHGC05177 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05177 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 351

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 24/93 (25%), Positives = 44/93 (47%)
 Frame = -3

Query: 689 NVYVCRIMFLFYADNVSKSQIINMTECILWHTDKIQHAYVNEFNNLSHLISTSGLWYV*S 510
           N  +  + F+   +N+++ ++I   E I  H+D +Q A++  + N+S    T   W    
Sbjct: 122 NRKIAVLFFMGLTNNLTEQKLIEEEERI--HSDIVQRAFLEHYTNMSRKHMTIMEW---- 175

Query: 509 FIMLGLLKNIIYLCSLYM*TFFNLSQLCTLCSS 411
            I  G  KN+ +L  +   TF ++  L T   S
Sbjct: 176 -ISNGYCKNVPFLVKVDDDTFVDIFHLITYLES 207


>UniRef50_A0DVE1 Cluster: Chromosome undetermined scaffold_65, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_65, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2163

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = -3

Query: 599  HTDKIQHAYVNEFNNLSHLISTSGLWYV*SFIMLGLLKNIIYLCSLYM*TFFNLSQLCT 423
            H D      V +   L H + +  L Y+ SF   GL++  +YL S Y  TF +L Q+ T
Sbjct: 1910 HVDSSVKCLVKKIIELLHSMESFALIYIKSFFYQGLIR--VYLSSYYDLTFTSLLQIVT 1966


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,628,601
Number of Sequences: 1657284
Number of extensions: 13488701
Number of successful extensions: 24728
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24719
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)