Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F08
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       34   0.001
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   3.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = -2

Query: 558 DLVLVKTHALSNASKGTTSKFMPKRDGPYRVKRVITPTTFILANLTDDDTVIGKYHSSDL 379
           D VL+K    S+      +KFMP   GPY++     P T+ +A+   ++ + G Y+ ++L
Sbjct: 404 DWVLLKNKVTSDTRTHQFAKFMPLYSGPYKIIAKPHPNTYQIADPVTNE-IKGVYNMTNL 462

Query: 378 TPFTQTSD 355
             + +  D
Sbjct: 463 KFYHRRDD 470


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 533 H*AMPRKELPANSCQNEMA 477
           H  +PRKE+PA S +  +A
Sbjct: 823 HGVVPRKEIPAKSAEQILA 841


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 441 FILANLTDDDTVIGKYHSSDLTPFTQ 364
           F LA+ T+     G Y  SD  P+T+
Sbjct: 268 FALADPTNTSLYAGTYGGSDAGPYTR 293


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 744 YEMHHDLRAXLDKENFVP 691
           Y+MHH+ +   D E F P
Sbjct: 91  YDMHHNPQVYPDPEKFDP 108


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 744 YEMHHDLRAXLDKENFVP 691
           Y+MHH+     D E F P
Sbjct: 392 YDMHHNPNVFPDPEKFDP 409


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 570 YKENDLVLVKTHALSNASKGTTSKFMPKRDG 478
           Y+E+D++LVK+    ++   T S  +P   G
Sbjct: 20  YREDDVLLVKSEPQLHSPCATGSNGLPAGAG 50


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 744 YEMHHDLRAXLDKENFVP 691
           Y+MHH+     D E F P
Sbjct: 392 YDMHHNPNVFPDPEKFDP 409


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 471 RVKRVITPTTFILANLTDDDT 409
           RVKR++    ++L NLT ++T
Sbjct: 31  RVKRMMRSWYYLLTNLTYNNT 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,462
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)