Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F05
         (847 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2G636 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_A2G636 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 916

 Score = 33.5 bits (73), Expect = 6.8
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11  RFTNLKQLPFSXQLQITSSLCL-SKRGQISCFF*XSKKNWYIHXIFTVMSVRKXYLNSLL 187
           R  N   L F  ++ +   L + +  G+I  F   SK + Y   +FT++ + K  +NS+ 
Sbjct: 43  RKENQHYLKFDPEMTVEYILFVGTTTGEILTFLIYSKNSKYEIKLFTIIDISKHRINSIT 102

Query: 188 PSKDADTCVSSYALLCT*KELSISNGLNTIIRMFY 292
            S D   C+ +   L     +SI + L+ I+   Y
Sbjct: 103 ESYDY-ICIQTVTSLSNDGSISIISVLDQIVLAHY 136


>UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1948

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 13/45 (28%), Positives = 27/45 (60%)
 Frame = -2

Query: 687  KLYSFIKYVLLFDFDIIYKSRLVKILSYEILYFVNCLFSESVSRH 553
            K Y  I Y+LL++F  ++K   +K   Y++LY +  + +E  +++
Sbjct: 1227 KYYKIIYYLLLYNFKYVFKKLKLKYSIYDLLYNLKDIHNEKQTKY 1271


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,967,154
Number of Sequences: 1657284
Number of extensions: 13206813
Number of successful extensions: 27558
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27548
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)