Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_F04
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8XJC3 Cluster: Putative uncharacterized protein CPE183...    34   3.2  
UniRef50_Q98RL8 Cluster: Putative uncharacterized protein orf714...    33   5.5  
UniRef50_UPI0000DB7DE7 Cluster: PREDICTED: similar to CG10793-PA...    33   7.3  
UniRef50_Q9TZE8 Cluster: Serpentine receptor, class i protein 43...    33   9.7  
UniRef50_A0CA30 Cluster: Chromosome undetermined scaffold_160, w...    33   9.7  

>UniRef50_Q8XJC3 Cluster: Putative uncharacterized protein CPE1837;
           n=3; Clostridium perfringens|Rep: Putative
           uncharacterized protein CPE1837 - Clostridium
           perfringens
          Length = 146

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 196 KWYLNFLRNKYL*DYFFFIKKKTDLYTIK*IYQFNLFFYKQI 321
           K Y NFL  +Y+ +Y   IKKK ++Y I  +  FNLFFY +I
Sbjct: 11  KKYKNFLPIEYVEEYNRKIKKKLNIY-ILFLLLFNLFFYGKI 51


>UniRef50_Q98RL8 Cluster: Putative uncharacterized protein orf714;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf714 - Guillardia theta (Cryptomonas phi)
          Length = 714

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
 Frame = +1

Query: 196 KWYLNFLR-NKYL*DYFFFIKKKTD----LYTIK*IYQFNLFFYKQIFNFDLST 342
           K++LN ++ N  L + FF +KK  +    LY+ K +  FN+F++    NF +ST
Sbjct: 332 KYFLNLMQSNSKLIETFFILKKMKNNNKVLYSFKNLIIFNMFYFLVSSNFKIST 385


>UniRef50_UPI0000DB7DE7 Cluster: PREDICTED: similar to CG10793-PA,
           partial; n=2; Apis mellifera|Rep: PREDICTED: similar to
           CG10793-PA, partial - Apis mellifera
          Length = 387

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = -1

Query: 633 SKEMLTYIFNHILIHSNN*IFIFSYSLVVMNVNENLSDC*TR*RNKMITKINQILECD 460
           S++ +  +F+    HS   IFI     +  NV  NLS+   R R++++TK++ ++  D
Sbjct: 284 SEKYIRVLFDLAYSHSPTIIFIDEIDWIATNVQNNLSEPAKRFRSELLTKLDGLVSTD 341


>UniRef50_Q9TZE8 Cluster: Serpentine receptor, class i protein 43;
           n=2; Caenorhabditis elegans|Rep: Serpentine receptor,
           class i protein 43 - Caenorhabditis elegans
          Length = 325

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 396 NYVISTTHLIL---YALVFFVFSKHHIQXXXXXXXXXXXXIVFNSHLNF 533
           NY++ TTHL+L   Y L+F  F++ H              I+FNS + F
Sbjct: 87  NYLLITTHLLLGIQYVLLFLCFARRHQAIAKIKQHHVIPEILFNSFIAF 135


>UniRef50_A0CA30 Cluster: Chromosome undetermined scaffold_160, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_160, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2128

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
 Frame = +1

Query: 277  IK*IYQFNLFFYKQI---FNFDLSTNSEQFKQ-K*LPVTKFIFSTMLFPQLI*S---YML 435
            IK I+  N+FF   +    NF+ +T  E  K  K L   K      +F  +       ++
Sbjct: 1193 IKQIFSNNIFFTTNVEITLNFNNNTIIEFEKPLKFLNFNKITILGAIFHPISNDKSKQIM 1252

Query: 436  *FSLYFLNITFKDLVDFCYHFIPSSCSTVT*IFIDIHDYQ*IRKNKYSIITVNQNVIKNV 615
             FSLY   IT +D++   Y  I         +F+++   Q ++ N + I+ + QN I+N 
Sbjct: 1253 FFSLYPQTITLQDII---YQQISKDNDQSNMLFVNV---QSVQFNNFKILGLVQNQIRN- 1305

Query: 616  C*HFFAARDSAVCEIQLSLLFPPFQILDSFLSKHY 720
               F    ++     Q +++F  FQIL+SFL   +
Sbjct: 1306 ---FIEITETVN---QKTIIFLNFQILNSFLQNQF 1334


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,634,149
Number of Sequences: 1657284
Number of extensions: 11212547
Number of successful extensions: 22587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22563
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)